Gene : AT5G52280 A. thaliana TAIR10
Defline:  (1 of 1) PTHR13140//PTHR13140:SF422 - MYOSIN // SUBFAMILY NOT NAMED Genomic Order:  4660
Name:  ? AT5G52280 Secondary Identifier:  ? PAC:19670001
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G52280 0.5kb upstream 0.5kb upstream 3922 true Chr5: 21226333-21230254 Arabidopsis thaliana
AT5G52280 0.5kb upstream 0.5kb upstream 500 false Chr5: 21226333-21226832 Arabidopsis thaliana
AT5G52280 0.5kb downstream 0.5kb downstream 3922 true Chr5: 21226833-21230754 Arabidopsis thaliana
AT5G52280 0.5kb downstream 0.5kb downstream 500 false Chr5: 21230255-21230754 Arabidopsis thaliana
AT5G52280 1.0kb upstream 1.0kb upstream 4422 true Chr5: 21225833-21230254 Arabidopsis thaliana
AT5G52280 1.0kb upstream 1.0kb upstream 1000 false Chr5: 21225833-21226832 Arabidopsis thaliana
AT5G52280 1.0kb downstream 1.0kb downstream 4422 true Chr5: 21226833-21231254 Arabidopsis thaliana
AT5G52280 1.0kb downstream 1.0kb downstream 1000 false Chr5: 21230255-21231254 Arabidopsis thaliana
AT5G52280 2.0kb upstream 2.0kb upstream 5422 true Chr5: 21224833-21230254 Arabidopsis thaliana
AT5G52280 2.0kb upstream 2.0kb upstream 2000 false Chr5: 21224833-21226832 Arabidopsis thaliana
AT5G52280 2.0kb downstream 2.0kb downstream 5422 true Chr5: 21226833-21232254 Arabidopsis thaliana
AT5G52280 2.0kb downstream 2.0kb downstream 2000 false Chr5: 21230255-21232254 Arabidopsis thaliana
AT5G52280 5.0kb upstream 5.0kb upstream 8422 true Chr5: 21221833-21230254 Arabidopsis thaliana
AT5G52280 5.0kb upstream 5.0kb upstream 5000 false Chr5: 21221833-21226832 Arabidopsis thaliana
AT5G52280 5.0kb downstream 5.0kb downstream 8422 true Chr5: 21226833-21235254 Arabidopsis thaliana
AT5G52280 5.0kb downstream 5.0kb downstream 5000 false Chr5: 21230255-21235254 Arabidopsis thaliana
AT5G52280 10.0kb upstream 10.0kb upstream 13422 true Chr5: 21216833-21230254 Arabidopsis thaliana
AT5G52280 10.0kb upstream 10.0kb upstream 10000 false Chr5: 21216833-21226832 Arabidopsis thaliana
AT5G52280 10.0kb downstream 10.0kb downstream 13422 true Chr5: 21226833-21240254 Arabidopsis thaliana
AT5G52280 10.0kb downstream 10.0kb downstream 10000 false Chr5: 21230255-21240254 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040955 5273 Angiosperm View MSA
122362584 5261 Brassicaceae View MSA
123837985 5264 Brassicales-Malvales View MSA
124346689 5266 SBM View MSA
124241587 5268 Malvidae View MSA
124073643 5270 Rosid View MSA
123747619 5271 Pentapetalae View MSA
122785648 5272 Eudicot View MSA
121348283 5274 Embryophyte View MSA
123428094 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.513        
cufflinks 22.193        
cufflinks 8.349        
cufflinks 20.722        
cufflinks 6.136       Low
cufflinks 27.217       High

0 Strain