Gene : AGL71 A. thaliana TAIR10
Primary Identifier:  ? AT5G51870 Defline:  (1 of 6) PTHR11945//PTHR11945:SF204 - MADS BOX PROTEIN // F21D18.12-RELATED
Genomic Order:  4619 Name:  ? AT5G51870
Secondary Identifier:  ? PAC:19672299
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G51870 0.5kb upstream 0.5kb upstream 3043 true Chr5: 21085462-21088504 Arabidopsis thaliana
AT5G51870 0.5kb upstream 0.5kb upstream 500 false Chr5: 21088005-21088504 Arabidopsis thaliana
AT5G51870 0.5kb downstream 0.5kb downstream 3043 true Chr5: 21084962-21088004 Arabidopsis thaliana
AT5G51870 0.5kb downstream 0.5kb downstream 500 false Chr5: 21084962-21085461 Arabidopsis thaliana
AT5G51870 1.0kb upstream 1.0kb upstream 3543 true Chr5: 21085462-21089004 Arabidopsis thaliana
AT5G51870 1.0kb upstream 1.0kb upstream 1000 false Chr5: 21088005-21089004 Arabidopsis thaliana
AT5G51870 1.0kb downstream 1.0kb downstream 3543 true Chr5: 21084462-21088004 Arabidopsis thaliana
AT5G51870 1.0kb downstream 1.0kb downstream 1000 false Chr5: 21084462-21085461 Arabidopsis thaliana
AT5G51870 2.0kb upstream 2.0kb upstream 4543 true Chr5: 21085462-21090004 Arabidopsis thaliana
AT5G51870 2.0kb upstream 2.0kb upstream 2000 false Chr5: 21088005-21090004 Arabidopsis thaliana
AT5G51870 2.0kb downstream 2.0kb downstream 4543 true Chr5: 21083462-21088004 Arabidopsis thaliana
AT5G51870 2.0kb downstream 2.0kb downstream 2000 false Chr5: 21083462-21085461 Arabidopsis thaliana
AT5G51870 5.0kb upstream 5.0kb upstream 7543 true Chr5: 21085462-21093004 Arabidopsis thaliana
AT5G51870 5.0kb upstream 5.0kb upstream 5000 false Chr5: 21088005-21093004 Arabidopsis thaliana
AT5G51870 5.0kb downstream 5.0kb downstream 7543 true Chr5: 21080462-21088004 Arabidopsis thaliana
AT5G51870 5.0kb downstream 5.0kb downstream 5000 false Chr5: 21080462-21085461 Arabidopsis thaliana
AT5G51870 10.0kb upstream 10.0kb upstream 12543 true Chr5: 21085462-21098004 Arabidopsis thaliana
AT5G51870 10.0kb upstream 10.0kb upstream 10000 false Chr5: 21088005-21098004 Arabidopsis thaliana
AT5G51870 10.0kb downstream 10.0kb downstream 12543 true Chr5: 21075462-21088004 Arabidopsis thaliana
AT5G51870 10.0kb downstream 10.0kb downstream 10000 false Chr5: 21075462-21085461 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377526 5261 Brassicaceae View MSA
123801556 5264 Brassicales-Malvales View MSA
124298845 5266 SBM View MSA
124150395 5268 Malvidae View MSA
124073798 5270 Rosid View MSA
123750432 5271 Pentapetalae View MSA
122795311 5272 Eudicot View MSA
122042392 5273 Angiosperm View MSA
121309956 5274 Embryophyte View MSA
123347576 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.002     Low Low
cufflinks 0.05     Low  
cufflinks 0.007     Low  
cufflinks 0.273     Low High
cufflinks 0.004     Low  
cufflinks 0.184     Low High

0 Strain