Gene : AT5G51620 A. thaliana TAIR10
Defline:  (1 of 2) PTHR12941 - ER MEMBRANE PROTEIN COMPLEX Genomic Order:  4591
Name:  ? AT5G51620 Secondary Identifier:  ? PAC:19666086
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G51620 0.5kb upstream 0.5kb upstream 1707 true Chr5: 20966546-20968252 Arabidopsis thaliana
AT5G51620 0.5kb upstream 0.5kb upstream 500 false Chr5: 20966546-20967045 Arabidopsis thaliana
AT5G51620 0.5kb downstream 0.5kb downstream 1707 true Chr5: 20967046-20968752 Arabidopsis thaliana
AT5G51620 0.5kb downstream 0.5kb downstream 500 false Chr5: 20968253-20968752 Arabidopsis thaliana
AT5G51620 1.0kb upstream 1.0kb upstream 2207 true Chr5: 20966046-20968252 Arabidopsis thaliana
AT5G51620 1.0kb upstream 1.0kb upstream 1000 false Chr5: 20966046-20967045 Arabidopsis thaliana
AT5G51620 1.0kb downstream 1.0kb downstream 2207 true Chr5: 20967046-20969252 Arabidopsis thaliana
AT5G51620 1.0kb downstream 1.0kb downstream 1000 false Chr5: 20968253-20969252 Arabidopsis thaliana
AT5G51620 2.0kb upstream 2.0kb upstream 3207 true Chr5: 20965046-20968252 Arabidopsis thaliana
AT5G51620 2.0kb upstream 2.0kb upstream 2000 false Chr5: 20965046-20967045 Arabidopsis thaliana
AT5G51620 2.0kb downstream 2.0kb downstream 3207 true Chr5: 20967046-20970252 Arabidopsis thaliana
AT5G51620 2.0kb downstream 2.0kb downstream 2000 false Chr5: 20968253-20970252 Arabidopsis thaliana
AT5G51620 5.0kb upstream 5.0kb upstream 6207 true Chr5: 20962046-20968252 Arabidopsis thaliana
AT5G51620 5.0kb upstream 5.0kb upstream 5000 false Chr5: 20962046-20967045 Arabidopsis thaliana
AT5G51620 5.0kb downstream 5.0kb downstream 6207 true Chr5: 20967046-20973252 Arabidopsis thaliana
AT5G51620 5.0kb downstream 5.0kb downstream 5000 false Chr5: 20968253-20973252 Arabidopsis thaliana
AT5G51620 10.0kb upstream 10.0kb upstream 11207 true Chr5: 20957046-20968252 Arabidopsis thaliana
AT5G51620 10.0kb upstream 10.0kb upstream 10000 false Chr5: 20957046-20967045 Arabidopsis thaliana
AT5G51620 10.0kb downstream 10.0kb downstream 11207 true Chr5: 20967046-20978252 Arabidopsis thaliana
AT5G51620 10.0kb downstream 10.0kb downstream 10000 false Chr5: 20968253-20978252 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121495048 5273 Angiosperm Singleton cluster - no MSA
122330933 5261 Brassicaceae Singleton cluster - no MSA
123772150 5264 Brassicales-Malvales Singleton cluster - no MSA
124270671 5266 SBM Singleton cluster - no MSA
124126730 5268 Malvidae Singleton cluster - no MSA
123855623 5270 Rosid Singleton cluster - no MSA
123441592 5271 Pentapetalae Singleton cluster - no MSA
122477176 5272 Eudicot Singleton cluster - no MSA
120768415 5274 Embryophyte Singleton cluster - no MSA
122810801 5275 Viridiplantae Singleton cluster - no MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.17        
cufflinks 8.867       High
cufflinks 6.143        
cufflinks 6.895        
cufflinks 6.027        
cufflinks 6.45        

0 Strain