Gene : ATTPPA A. thaliana TAIR10
Primary Identifier:  ? AT5G51460 Defline:  (1 of 3) PTHR10788:SF38 - TREHALOSE-PHOSPHATE PHOSPHATASE F-RELATED
Genomic Order:  4574 Name:  ? AT5G51460
Secondary Identifier:  ? PAC:19669171
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G51460 0.5kb upstream 0.5kb upstream 4063 true Chr5: 20900477-20904539 Arabidopsis thaliana
AT5G51460 0.5kb upstream 0.5kb upstream 500 false Chr5: 20900477-20900976 Arabidopsis thaliana
AT5G51460 0.5kb downstream 0.5kb downstream 4063 true Chr5: 20900977-20905039 Arabidopsis thaliana
AT5G51460 0.5kb downstream 0.5kb downstream 500 false Chr5: 20904540-20905039 Arabidopsis thaliana
AT5G51460 1.0kb upstream 1.0kb upstream 4563 true Chr5: 20899977-20904539 Arabidopsis thaliana
AT5G51460 1.0kb upstream 1.0kb upstream 1000 false Chr5: 20899977-20900976 Arabidopsis thaliana
AT5G51460 1.0kb downstream 1.0kb downstream 4563 true Chr5: 20900977-20905539 Arabidopsis thaliana
AT5G51460 1.0kb downstream 1.0kb downstream 1000 false Chr5: 20904540-20905539 Arabidopsis thaliana
AT5G51460 2.0kb upstream 2.0kb upstream 5563 true Chr5: 20898977-20904539 Arabidopsis thaliana
AT5G51460 2.0kb upstream 2.0kb upstream 2000 false Chr5: 20898977-20900976 Arabidopsis thaliana
AT5G51460 2.0kb downstream 2.0kb downstream 5563 true Chr5: 20900977-20906539 Arabidopsis thaliana
AT5G51460 2.0kb downstream 2.0kb downstream 2000 false Chr5: 20904540-20906539 Arabidopsis thaliana
AT5G51460 5.0kb upstream 5.0kb upstream 8563 true Chr5: 20895977-20904539 Arabidopsis thaliana
AT5G51460 5.0kb upstream 5.0kb upstream 5000 false Chr5: 20895977-20900976 Arabidopsis thaliana
AT5G51460 5.0kb downstream 5.0kb downstream 8563 true Chr5: 20900977-20909539 Arabidopsis thaliana
AT5G51460 5.0kb downstream 5.0kb downstream 5000 false Chr5: 20904540-20909539 Arabidopsis thaliana
AT5G51460 10.0kb upstream 10.0kb upstream 13563 true Chr5: 20890977-20904539 Arabidopsis thaliana
AT5G51460 10.0kb upstream 10.0kb upstream 10000 false Chr5: 20890977-20900976 Arabidopsis thaliana
AT5G51460 10.0kb downstream 10.0kb downstream 13563 true Chr5: 20900977-20914539 Arabidopsis thaliana
AT5G51460 10.0kb downstream 10.0kb downstream 10000 false Chr5: 20904540-20914539 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369387 5261 Brassicaceae View MSA
123834936 5264 Brassicales-Malvales View MSA
124342221 5266 SBM View MSA
124250650 5268 Malvidae View MSA
124065579 5270 Rosid View MSA
123746570 5271 Pentapetalae View MSA
122792974 5272 Eudicot View MSA
122044363 5273 Angiosperm View MSA
121351669 5274 Embryophyte View MSA
123427869 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.794       High
cufflinks 0.657        
cufflinks 0.808        
cufflinks 0.955        
cufflinks 0.647        
cufflinks 1.335        

0 Strain