Gene : AT5G51160 A. thaliana TAIR10
Defline:  (1 of 1) PTHR24177:SF14 - ANKYRIN REPEAT-CONTAINING PROTEIN Genomic Order:  4544
Name:  ? AT5G51160 Secondary Identifier:  ? PAC:19668263
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G51160 0.5kb upstream 0.5kb upstream 2131 true Chr5: 20791711-20793841 Arabidopsis thaliana
AT5G51160 0.5kb upstream 0.5kb upstream 500 false Chr5: 20791711-20792210 Arabidopsis thaliana
AT5G51160 0.5kb downstream 0.5kb downstream 2131 true Chr5: 20792211-20794341 Arabidopsis thaliana
AT5G51160 0.5kb downstream 0.5kb downstream 500 false Chr5: 20793842-20794341 Arabidopsis thaliana
AT5G51160 1.0kb upstream 1.0kb upstream 2631 true Chr5: 20791211-20793841 Arabidopsis thaliana
AT5G51160 1.0kb upstream 1.0kb upstream 1000 false Chr5: 20791211-20792210 Arabidopsis thaliana
AT5G51160 1.0kb downstream 1.0kb downstream 2631 true Chr5: 20792211-20794841 Arabidopsis thaliana
AT5G51160 1.0kb downstream 1.0kb downstream 1000 false Chr5: 20793842-20794841 Arabidopsis thaliana
AT5G51160 2.0kb upstream 2.0kb upstream 3631 true Chr5: 20790211-20793841 Arabidopsis thaliana
AT5G51160 2.0kb upstream 2.0kb upstream 2000 false Chr5: 20790211-20792210 Arabidopsis thaliana
AT5G51160 2.0kb downstream 2.0kb downstream 3631 true Chr5: 20792211-20795841 Arabidopsis thaliana
AT5G51160 2.0kb downstream 2.0kb downstream 2000 false Chr5: 20793842-20795841 Arabidopsis thaliana
AT5G51160 5.0kb upstream 5.0kb upstream 6631 true Chr5: 20787211-20793841 Arabidopsis thaliana
AT5G51160 5.0kb upstream 5.0kb upstream 5000 false Chr5: 20787211-20792210 Arabidopsis thaliana
AT5G51160 5.0kb downstream 5.0kb downstream 6631 true Chr5: 20792211-20798841 Arabidopsis thaliana
AT5G51160 5.0kb downstream 5.0kb downstream 5000 false Chr5: 20793842-20798841 Arabidopsis thaliana
AT5G51160 10.0kb upstream 10.0kb upstream 11631 true Chr5: 20782211-20793841 Arabidopsis thaliana
AT5G51160 10.0kb upstream 10.0kb upstream 10000 false Chr5: 20782211-20792210 Arabidopsis thaliana
AT5G51160 10.0kb downstream 10.0kb downstream 11631 true Chr5: 20792211-20803841 Arabidopsis thaliana
AT5G51160 10.0kb downstream 10.0kb downstream 10000 false Chr5: 20793842-20803841 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368929 5261 Brassicaceae View MSA
123841287 5264 Brassicales-Malvales View MSA
124348414 5266 SBM View MSA
124249893 5268 Malvidae View MSA
124074725 5270 Rosid View MSA
123753624 5271 Pentapetalae View MSA
122797775 5272 Eudicot View MSA
122051097 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351705 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.165     Low  
cufflinks 0.74        
cufflinks 0.032     Low Low
cufflinks 2.003       High
cufflinks 0.067     Low  
cufflinks 0.858        

0 Strain