Gene : AT5G53310 A. thaliana TAIR10
Defline:  (1 of 1) PF06017 - Unconventional myosin tail, actin- and lipid-binding (Myosin_TH1) Genomic Order:  4773
Name:  ? AT5G53310 Secondary Identifier:  ? PAC:19666550
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G53310 0.5kb upstream 0.5kb upstream 2275 true Chr5: 21634081-21636355 Arabidopsis thaliana
AT5G53310 0.5kb upstream 0.5kb upstream 500 false Chr5: 21634081-21634580 Arabidopsis thaliana
AT5G53310 0.5kb downstream 0.5kb downstream 2275 true Chr5: 21634581-21636855 Arabidopsis thaliana
AT5G53310 0.5kb downstream 0.5kb downstream 500 false Chr5: 21636356-21636855 Arabidopsis thaliana
AT5G53310 1.0kb upstream 1.0kb upstream 2775 true Chr5: 21633581-21636355 Arabidopsis thaliana
AT5G53310 1.0kb upstream 1.0kb upstream 1000 false Chr5: 21633581-21634580 Arabidopsis thaliana
AT5G53310 1.0kb downstream 1.0kb downstream 2775 true Chr5: 21634581-21637355 Arabidopsis thaliana
AT5G53310 1.0kb downstream 1.0kb downstream 1000 false Chr5: 21636356-21637355 Arabidopsis thaliana
AT5G53310 2.0kb upstream 2.0kb upstream 3775 true Chr5: 21632581-21636355 Arabidopsis thaliana
AT5G53310 2.0kb upstream 2.0kb upstream 2000 false Chr5: 21632581-21634580 Arabidopsis thaliana
AT5G53310 2.0kb downstream 2.0kb downstream 3775 true Chr5: 21634581-21638355 Arabidopsis thaliana
AT5G53310 2.0kb downstream 2.0kb downstream 2000 false Chr5: 21636356-21638355 Arabidopsis thaliana
AT5G53310 5.0kb upstream 5.0kb upstream 6775 true Chr5: 21629581-21636355 Arabidopsis thaliana
AT5G53310 5.0kb upstream 5.0kb upstream 5000 false Chr5: 21629581-21634580 Arabidopsis thaliana
AT5G53310 5.0kb downstream 5.0kb downstream 6775 true Chr5: 21634581-21641355 Arabidopsis thaliana
AT5G53310 5.0kb downstream 5.0kb downstream 5000 false Chr5: 21636356-21641355 Arabidopsis thaliana
AT5G53310 10.0kb upstream 10.0kb upstream 11775 true Chr5: 21624581-21636355 Arabidopsis thaliana
AT5G53310 10.0kb upstream 10.0kb upstream 10000 false Chr5: 21624581-21634580 Arabidopsis thaliana
AT5G53310 10.0kb downstream 10.0kb downstream 11775 true Chr5: 21634581-21646355 Arabidopsis thaliana
AT5G53310 10.0kb downstream 10.0kb downstream 10000 false Chr5: 21636356-21646355 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373666 5261 Brassicaceae View MSA
123828524 5264 Brassicales-Malvales View MSA
124344033 5266 SBM View MSA
124242645 5268 Malvidae View MSA
124065826 5270 Rosid View MSA
123738751 5271 Pentapetalae View MSA
122793214 5272 Eudicot View MSA
122043763 5273 Angiosperm View MSA
121346835 5274 Embryophyte View MSA
123425388 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.329        
cufflinks 25.26       High
cufflinks 14.757       Low
cufflinks 21.88        
cufflinks 15.701        
cufflinks 24.717       High

0 Strain