Gene : AT5G52750 A. thaliana TAIR10
Defline:  (1 of 10) PTHR22814//PTHR22814:SF129 - COPPER TRANSPORT PROTEIN ATOX1-RELATED // COPPER TRANSPORT FAMILY PROTEIN-RELATED Genomic Order:  4710
Name:  ? AT5G52750 Secondary Identifier:  ? PAC:19665598
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G52750 0.5kb upstream 0.5kb upstream 1382 true Chr5: 21383543-21384924 Arabidopsis thaliana
AT5G52750 0.5kb upstream 0.5kb upstream 500 false Chr5: 21383543-21384042 Arabidopsis thaliana
AT5G52750 0.5kb downstream 0.5kb downstream 1382 true Chr5: 21384043-21385424 Arabidopsis thaliana
AT5G52750 0.5kb downstream 0.5kb downstream 500 false Chr5: 21384925-21385424 Arabidopsis thaliana
AT5G52750 1.0kb upstream 1.0kb upstream 1882 true Chr5: 21383043-21384924 Arabidopsis thaliana
AT5G52750 1.0kb upstream 1.0kb upstream 1000 false Chr5: 21383043-21384042 Arabidopsis thaliana
AT5G52750 1.0kb downstream 1.0kb downstream 1882 true Chr5: 21384043-21385924 Arabidopsis thaliana
AT5G52750 1.0kb downstream 1.0kb downstream 1000 false Chr5: 21384925-21385924 Arabidopsis thaliana
AT5G52750 2.0kb upstream 2.0kb upstream 2882 true Chr5: 21382043-21384924 Arabidopsis thaliana
AT5G52750 2.0kb upstream 2.0kb upstream 2000 false Chr5: 21382043-21384042 Arabidopsis thaliana
AT5G52750 2.0kb downstream 2.0kb downstream 2882 true Chr5: 21384043-21386924 Arabidopsis thaliana
AT5G52750 2.0kb downstream 2.0kb downstream 2000 false Chr5: 21384925-21386924 Arabidopsis thaliana
AT5G52750 5.0kb upstream 5.0kb upstream 5882 true Chr5: 21379043-21384924 Arabidopsis thaliana
AT5G52750 5.0kb upstream 5.0kb upstream 5000 false Chr5: 21379043-21384042 Arabidopsis thaliana
AT5G52750 5.0kb downstream 5.0kb downstream 5882 true Chr5: 21384043-21389924 Arabidopsis thaliana
AT5G52750 5.0kb downstream 5.0kb downstream 5000 false Chr5: 21384925-21389924 Arabidopsis thaliana
AT5G52750 10.0kb upstream 10.0kb upstream 10882 true Chr5: 21374043-21384924 Arabidopsis thaliana
AT5G52750 10.0kb upstream 10.0kb upstream 10000 false Chr5: 21374043-21384042 Arabidopsis thaliana
AT5G52750 10.0kb downstream 10.0kb downstream 10882 true Chr5: 21384043-21394924 Arabidopsis thaliana
AT5G52750 10.0kb downstream 10.0kb downstream 10000 false Chr5: 21384925-21394924 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381366 5261 Brassicaceae View MSA
123838445 5264 Brassicales-Malvales View MSA
124349979 5266 SBM View MSA
124250678 5268 Malvidae View MSA
124072200 5270 Rosid View MSA
123751300 5271 Pentapetalae View MSA
122793053 5272 Eudicot View MSA
122051560 5273 Angiosperm View MSA
121351529 5274 Embryophyte View MSA
123424750 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 96.537     High High
cufflinks 24.908        
cufflinks 33.107     High  
cufflinks 29.093        
cufflinks 40.856     High  
cufflinks 23.166        

0 Strain