Gene : AT5G52800 A. thaliana TAIR10
Defline:  (1 of 1) PTHR31399:SF0 - DNA-DIRECTED PRIMASE/POLYMERASE PROTEIN Genomic Order:  4715
Name:  ? AT5G52800 Secondary Identifier:  ? PAC:19671842
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G52800 0.5kb upstream 0.5kb upstream 3976 true Chr5: 21395444-21399419 Arabidopsis thaliana
AT5G52800 0.5kb upstream 0.5kb upstream 500 false Chr5: 21395444-21395943 Arabidopsis thaliana
AT5G52800 0.5kb downstream 0.5kb downstream 3976 true Chr5: 21395944-21399919 Arabidopsis thaliana
AT5G52800 0.5kb downstream 0.5kb downstream 500 false Chr5: 21399420-21399919 Arabidopsis thaliana
AT5G52800 1.0kb upstream 1.0kb upstream 4476 true Chr5: 21394944-21399419 Arabidopsis thaliana
AT5G52800 1.0kb upstream 1.0kb upstream 1000 false Chr5: 21394944-21395943 Arabidopsis thaliana
AT5G52800 1.0kb downstream 1.0kb downstream 4476 true Chr5: 21395944-21400419 Arabidopsis thaliana
AT5G52800 1.0kb downstream 1.0kb downstream 1000 false Chr5: 21399420-21400419 Arabidopsis thaliana
AT5G52800 2.0kb upstream 2.0kb upstream 5476 true Chr5: 21393944-21399419 Arabidopsis thaliana
AT5G52800 2.0kb upstream 2.0kb upstream 2000 false Chr5: 21393944-21395943 Arabidopsis thaliana
AT5G52800 2.0kb downstream 2.0kb downstream 5476 true Chr5: 21395944-21401419 Arabidopsis thaliana
AT5G52800 2.0kb downstream 2.0kb downstream 2000 false Chr5: 21399420-21401419 Arabidopsis thaliana
AT5G52800 5.0kb upstream 5.0kb upstream 8476 true Chr5: 21390944-21399419 Arabidopsis thaliana
AT5G52800 5.0kb upstream 5.0kb upstream 5000 false Chr5: 21390944-21395943 Arabidopsis thaliana
AT5G52800 5.0kb downstream 5.0kb downstream 8476 true Chr5: 21395944-21404419 Arabidopsis thaliana
AT5G52800 5.0kb downstream 5.0kb downstream 5000 false Chr5: 21399420-21404419 Arabidopsis thaliana
AT5G52800 10.0kb upstream 10.0kb upstream 13476 true Chr5: 21385944-21399419 Arabidopsis thaliana
AT5G52800 10.0kb upstream 10.0kb upstream 10000 false Chr5: 21385944-21395943 Arabidopsis thaliana
AT5G52800 10.0kb downstream 10.0kb downstream 13476 true Chr5: 21395944-21409419 Arabidopsis thaliana
AT5G52800 10.0kb downstream 10.0kb downstream 10000 false Chr5: 21399420-21409419 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040891 5273 Angiosperm View MSA
122369877 5261 Brassicaceae View MSA
123828171 5264 Brassicales-Malvales View MSA
124339154 5266 SBM View MSA
124243272 5268 Malvidae View MSA
124065964 5270 Rosid View MSA
123740787 5271 Pentapetalae View MSA
122790356 5272 Eudicot View MSA
121345588 5274 Embryophyte View MSA
123427988 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.36        
cufflinks 0.315     Low  
cufflinks 0.142     Low Low
cufflinks 0.353     Low  
cufflinks 0.14     Low Low
cufflinks 0.435        

0 Strain