Gene : SRT1 A. thaliana TAIR10
Primary Identifier:  ? AT5G55760 Defline:  (1 of 1) K11416 - mono-ADP-ribosyltransferase sirtuin 6 (SIRT6, SIR2L6)
Genomic Order:  5042 Name:  ? AT5G55760
Secondary Identifier:  ? PAC:19666748
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G55760 0.5kb upstream 0.5kb upstream 4242 true Chr5: 22566722-22570963 Arabidopsis thaliana
AT5G55760 0.5kb upstream 0.5kb upstream 500 false Chr5: 22566722-22567221 Arabidopsis thaliana
AT5G55760 0.5kb downstream 0.5kb downstream 4242 true Chr5: 22567222-22571463 Arabidopsis thaliana
AT5G55760 0.5kb downstream 0.5kb downstream 500 false Chr5: 22570964-22571463 Arabidopsis thaliana
AT5G55760 1.0kb upstream 1.0kb upstream 4742 true Chr5: 22566222-22570963 Arabidopsis thaliana
AT5G55760 1.0kb upstream 1.0kb upstream 1000 false Chr5: 22566222-22567221 Arabidopsis thaliana
AT5G55760 1.0kb downstream 1.0kb downstream 4742 true Chr5: 22567222-22571963 Arabidopsis thaliana
AT5G55760 1.0kb downstream 1.0kb downstream 1000 false Chr5: 22570964-22571963 Arabidopsis thaliana
AT5G55760 2.0kb upstream 2.0kb upstream 5742 true Chr5: 22565222-22570963 Arabidopsis thaliana
AT5G55760 2.0kb upstream 2.0kb upstream 2000 false Chr5: 22565222-22567221 Arabidopsis thaliana
AT5G55760 2.0kb downstream 2.0kb downstream 5742 true Chr5: 22567222-22572963 Arabidopsis thaliana
AT5G55760 2.0kb downstream 2.0kb downstream 2000 false Chr5: 22570964-22572963 Arabidopsis thaliana
AT5G55760 5.0kb upstream 5.0kb upstream 8742 true Chr5: 22562222-22570963 Arabidopsis thaliana
AT5G55760 5.0kb upstream 5.0kb upstream 5000 false Chr5: 22562222-22567221 Arabidopsis thaliana
AT5G55760 5.0kb downstream 5.0kb downstream 8742 true Chr5: 22567222-22575963 Arabidopsis thaliana
AT5G55760 5.0kb downstream 5.0kb downstream 5000 false Chr5: 22570964-22575963 Arabidopsis thaliana
AT5G55760 10.0kb upstream 10.0kb upstream 13742 true Chr5: 22557222-22570963 Arabidopsis thaliana
AT5G55760 10.0kb upstream 10.0kb upstream 10000 false Chr5: 22557222-22567221 Arabidopsis thaliana
AT5G55760 10.0kb downstream 10.0kb downstream 13742 true Chr5: 22567222-22580963 Arabidopsis thaliana
AT5G55760 10.0kb downstream 10.0kb downstream 10000 false Chr5: 22570964-22580963 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370299 5261 Brassicaceae View MSA
123829293 5264 Brassicales-Malvales View MSA
124338137 5266 SBM View MSA
124243426 5268 Malvidae View MSA
124067178 5270 Rosid View MSA
123739224 5271 Pentapetalae View MSA
122797403 5272 Eudicot View MSA
122046864 5273 Angiosperm View MSA
121350712 5274 Embryophyte View MSA
123427715 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.952        
cufflinks 3.033        
cufflinks 1.363       Low
cufflinks 3.008        
cufflinks 1.411       Low
cufflinks 3.012        

0 Strain