Gene : KCO1 A. thaliana TAIR10
Primary Identifier:  ? AT5G55630 Defline:  (1 of 1) PTHR11003//PTHR11003:SF135 - POTASSIUM CHANNEL, SUBFAMILY K // SUBFAMILY NOT NAMED
Genomic Order:  5029 Name:  ? AT5G55630
Secondary Identifier:  ? PAC:19670781
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0 Pathways

Genomics

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Expression

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4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G55630 0.5kb upstream 0.5kb upstream 2265 true Chr5: 22530858-22533122 Arabidopsis thaliana
AT5G55630 0.5kb upstream 0.5kb upstream 500 false Chr5: 22530858-22531357 Arabidopsis thaliana
AT5G55630 0.5kb downstream 0.5kb downstream 2265 true Chr5: 22531358-22533622 Arabidopsis thaliana
AT5G55630 0.5kb downstream 0.5kb downstream 500 false Chr5: 22533123-22533622 Arabidopsis thaliana
AT5G55630 1.0kb upstream 1.0kb upstream 2765 true Chr5: 22530358-22533122 Arabidopsis thaliana
AT5G55630 1.0kb upstream 1.0kb upstream 1000 false Chr5: 22530358-22531357 Arabidopsis thaliana
AT5G55630 1.0kb downstream 1.0kb downstream 2765 true Chr5: 22531358-22534122 Arabidopsis thaliana
AT5G55630 1.0kb downstream 1.0kb downstream 1000 false Chr5: 22533123-22534122 Arabidopsis thaliana
AT5G55630 2.0kb upstream 2.0kb upstream 3765 true Chr5: 22529358-22533122 Arabidopsis thaliana
AT5G55630 2.0kb upstream 2.0kb upstream 2000 false Chr5: 22529358-22531357 Arabidopsis thaliana
AT5G55630 2.0kb downstream 2.0kb downstream 3765 true Chr5: 22531358-22535122 Arabidopsis thaliana
AT5G55630 2.0kb downstream 2.0kb downstream 2000 false Chr5: 22533123-22535122 Arabidopsis thaliana
AT5G55630 5.0kb upstream 5.0kb upstream 6765 true Chr5: 22526358-22533122 Arabidopsis thaliana
AT5G55630 5.0kb upstream 5.0kb upstream 5000 false Chr5: 22526358-22531357 Arabidopsis thaliana
AT5G55630 5.0kb downstream 5.0kb downstream 6765 true Chr5: 22531358-22538122 Arabidopsis thaliana
AT5G55630 5.0kb downstream 5.0kb downstream 5000 false Chr5: 22533123-22538122 Arabidopsis thaliana
AT5G55630 10.0kb upstream 10.0kb upstream 11765 true Chr5: 22521358-22533122 Arabidopsis thaliana
AT5G55630 10.0kb upstream 10.0kb upstream 10000 false Chr5: 22521358-22531357 Arabidopsis thaliana
AT5G55630 10.0kb downstream 10.0kb downstream 11765 true Chr5: 22531358-22543122 Arabidopsis thaliana
AT5G55630 10.0kb downstream 10.0kb downstream 10000 false Chr5: 22533123-22543122 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373014 5261 Brassicaceae View MSA
123830174 5264 Brassicales-Malvales View MSA
124342733 5266 SBM View MSA
124248548 5268 Malvidae View MSA
124070017 5270 Rosid View MSA
123748473 5271 Pentapetalae View MSA
122795341 5272 Eudicot View MSA
122044893 5273 Angiosperm View MSA
121351714 5274 Embryophyte View MSA
123382287 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.558       High
cufflinks 6.184        
cufflinks 6.809        
cufflinks 5.324       Low
cufflinks 5.798        
cufflinks 6.431        

0 Strain