Gene : RAN3 A. thaliana TAIR10
Primary Identifier:  ? AT5G55190 Defline:  (1 of 4) K07936 - GTP-binding nuclear protein Ran (RAN)
Genomic Order:  4983 Name:  ? AT5G55190
Secondary Identifier:  ? PAC:19672769
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

9 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana ILEUDEG-PWY Arabidopsis thaliana pathologic  
Athaliana PWY-5136 Arabidopsis thaliana pathologic  
Athaliana PWY-5138 Arabidopsis thaliana pathologic  
Athaliana PWY-561 Arabidopsis thaliana pathologic  
Athaliana PWY-6435 Arabidopsis thaliana pathologic  
Athaliana PWY-7036 Arabidopsis thaliana pathologic  
Athaliana PWY-735 Arabidopsis thaliana pathologic  
Athaliana PWY-7606 Arabidopsis thaliana pathologic  
Athaliana VALDEG-PWY Arabidopsis thaliana pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G55190 0.5kb upstream 0.5kb upstream 2497 true Chr5: 22391676-22394172 Arabidopsis thaliana
AT5G55190 0.5kb upstream 0.5kb upstream 500 false Chr5: 22391676-22392175 Arabidopsis thaliana
AT5G55190 0.5kb downstream 0.5kb downstream 2497 true Chr5: 22392176-22394672 Arabidopsis thaliana
AT5G55190 0.5kb downstream 0.5kb downstream 500 false Chr5: 22394173-22394672 Arabidopsis thaliana
AT5G55190 1.0kb upstream 1.0kb upstream 2997 true Chr5: 22391176-22394172 Arabidopsis thaliana
AT5G55190 1.0kb upstream 1.0kb upstream 1000 false Chr5: 22391176-22392175 Arabidopsis thaliana
AT5G55190 1.0kb downstream 1.0kb downstream 2997 true Chr5: 22392176-22395172 Arabidopsis thaliana
AT5G55190 1.0kb downstream 1.0kb downstream 1000 false Chr5: 22394173-22395172 Arabidopsis thaliana
AT5G55190 2.0kb upstream 2.0kb upstream 3997 true Chr5: 22390176-22394172 Arabidopsis thaliana
AT5G55190 2.0kb upstream 2.0kb upstream 2000 false Chr5: 22390176-22392175 Arabidopsis thaliana
AT5G55190 2.0kb downstream 2.0kb downstream 3997 true Chr5: 22392176-22396172 Arabidopsis thaliana
AT5G55190 2.0kb downstream 2.0kb downstream 2000 false Chr5: 22394173-22396172 Arabidopsis thaliana
AT5G55190 5.0kb upstream 5.0kb upstream 6997 true Chr5: 22387176-22394172 Arabidopsis thaliana
AT5G55190 5.0kb upstream 5.0kb upstream 5000 false Chr5: 22387176-22392175 Arabidopsis thaliana
AT5G55190 5.0kb downstream 5.0kb downstream 6997 true Chr5: 22392176-22399172 Arabidopsis thaliana
AT5G55190 5.0kb downstream 5.0kb downstream 5000 false Chr5: 22394173-22399172 Arabidopsis thaliana
AT5G55190 10.0kb upstream 10.0kb upstream 11997 true Chr5: 22382176-22394172 Arabidopsis thaliana
AT5G55190 10.0kb upstream 10.0kb upstream 10000 false Chr5: 22382176-22392175 Arabidopsis thaliana
AT5G55190 10.0kb downstream 10.0kb downstream 11997 true Chr5: 22392176-22404172 Arabidopsis thaliana
AT5G55190 10.0kb downstream 10.0kb downstream 10000 false Chr5: 22394173-22404172 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371036 5261 Brassicaceae View MSA
123829338 5264 Brassicales-Malvales View MSA
124347070 5266 SBM View MSA
124237166 5268 Malvidae View MSA
124073929 5270 Rosid View MSA
123749309 5271 Pentapetalae View MSA
122790069 5272 Eudicot View MSA
122051651 5273 Angiosperm View MSA
121349425 5274 Embryophyte View MSA
123424763 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 54.413     High Low
cufflinks 87.55     High  
cufflinks 58.98     High  
cufflinks 88.551     High High
cufflinks 59.884     High  
cufflinks 83.56     High  

0 Strain