Gene : AT5G55070 A. thaliana TAIR10
Defline:  (1 of 2) 2.3.1.61 - Dihydrolipoyllysine-residue succinyltransferase / Succinyl-CoA:dihydrolipoate S-succinyltransferase Genomic Order:  4967
Name:  ? AT5G55070 Secondary Identifier:  ? PAC:19671819
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-5084 Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G55070 0.5kb upstream 0.5kb upstream 4107 true Chr5: 22346711-22350817 Arabidopsis thaliana
AT5G55070 0.5kb upstream 0.5kb upstream 500 false Chr5: 22346711-22347210 Arabidopsis thaliana
AT5G55070 0.5kb downstream 0.5kb downstream 4107 true Chr5: 22347211-22351317 Arabidopsis thaliana
AT5G55070 0.5kb downstream 0.5kb downstream 500 false Chr5: 22350818-22351317 Arabidopsis thaliana
AT5G55070 1.0kb upstream 1.0kb upstream 4607 true Chr5: 22346211-22350817 Arabidopsis thaliana
AT5G55070 1.0kb upstream 1.0kb upstream 1000 false Chr5: 22346211-22347210 Arabidopsis thaliana
AT5G55070 1.0kb downstream 1.0kb downstream 4607 true Chr5: 22347211-22351817 Arabidopsis thaliana
AT5G55070 1.0kb downstream 1.0kb downstream 1000 false Chr5: 22350818-22351817 Arabidopsis thaliana
AT5G55070 2.0kb upstream 2.0kb upstream 5607 true Chr5: 22345211-22350817 Arabidopsis thaliana
AT5G55070 2.0kb upstream 2.0kb upstream 2000 false Chr5: 22345211-22347210 Arabidopsis thaliana
AT5G55070 2.0kb downstream 2.0kb downstream 5607 true Chr5: 22347211-22352817 Arabidopsis thaliana
AT5G55070 2.0kb downstream 2.0kb downstream 2000 false Chr5: 22350818-22352817 Arabidopsis thaliana
AT5G55070 5.0kb upstream 5.0kb upstream 8607 true Chr5: 22342211-22350817 Arabidopsis thaliana
AT5G55070 5.0kb upstream 5.0kb upstream 5000 false Chr5: 22342211-22347210 Arabidopsis thaliana
AT5G55070 5.0kb downstream 5.0kb downstream 8607 true Chr5: 22347211-22355817 Arabidopsis thaliana
AT5G55070 5.0kb downstream 5.0kb downstream 5000 false Chr5: 22350818-22355817 Arabidopsis thaliana
AT5G55070 10.0kb upstream 10.0kb upstream 13607 true Chr5: 22337211-22350817 Arabidopsis thaliana
AT5G55070 10.0kb upstream 10.0kb upstream 10000 false Chr5: 22337211-22347210 Arabidopsis thaliana
AT5G55070 10.0kb downstream 10.0kb downstream 13607 true Chr5: 22347211-22360817 Arabidopsis thaliana
AT5G55070 10.0kb downstream 10.0kb downstream 10000 false Chr5: 22350818-22360817 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362639 5261 Brassicaceae View MSA
123838684 5264 Brassicales-Malvales View MSA
124343102 5266 SBM View MSA
124250651 5268 Malvidae View MSA
124065559 5270 Rosid View MSA
123743660 5271 Pentapetalae View MSA
122793547 5272 Eudicot View MSA
122045600 5273 Angiosperm View MSA
121347048 5274 Embryophyte View MSA
123423906 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 28.426        
cufflinks 27.688        
cufflinks 24.385        
cufflinks 30.513     High  
cufflinks 23.213       Low
cufflinks 32.514     High High

0 Strain