Gene : GDU3 A. thaliana TAIR10
Primary Identifier:  ? AT5G57685 Defline:  (1 of 4) PTHR33228//PTHR33228:SF5 - FAMILY NOT NAMED // PROTEIN GLUTAMINE DUMPER 1-RELATED
Genomic Order:  5251 Name:  ? AT5G57685
Secondary Identifier:  ? PAC:19673151
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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G57685 0.5kb upstream 0.5kb upstream 1364 true Chr5: 23366004-23367367 Arabidopsis thaliana
AT5G57685 0.5kb upstream 0.5kb upstream 500 false Chr5: 23366868-23367367 Arabidopsis thaliana
AT5G57685 0.5kb downstream 0.5kb downstream 1364 true Chr5: 23365504-23366867 Arabidopsis thaliana
AT5G57685 0.5kb downstream 0.5kb downstream 500 false Chr5: 23365504-23366003 Arabidopsis thaliana
AT5G57685 1.0kb upstream 1.0kb upstream 1864 true Chr5: 23366004-23367867 Arabidopsis thaliana
AT5G57685 1.0kb upstream 1.0kb upstream 1000 false Chr5: 23366868-23367867 Arabidopsis thaliana
AT5G57685 1.0kb downstream 1.0kb downstream 1864 true Chr5: 23365004-23366867 Arabidopsis thaliana
AT5G57685 1.0kb downstream 1.0kb downstream 1000 false Chr5: 23365004-23366003 Arabidopsis thaliana
AT5G57685 2.0kb upstream 2.0kb upstream 2864 true Chr5: 23366004-23368867 Arabidopsis thaliana
AT5G57685 2.0kb upstream 2.0kb upstream 2000 false Chr5: 23366868-23368867 Arabidopsis thaliana
AT5G57685 2.0kb downstream 2.0kb downstream 2864 true Chr5: 23364004-23366867 Arabidopsis thaliana
AT5G57685 2.0kb downstream 2.0kb downstream 2000 false Chr5: 23364004-23366003 Arabidopsis thaliana
AT5G57685 5.0kb upstream 5.0kb upstream 5864 true Chr5: 23366004-23371867 Arabidopsis thaliana
AT5G57685 5.0kb upstream 5.0kb upstream 5000 false Chr5: 23366868-23371867 Arabidopsis thaliana
AT5G57685 5.0kb downstream 5.0kb downstream 5864 true Chr5: 23361004-23366867 Arabidopsis thaliana
AT5G57685 5.0kb downstream 5.0kb downstream 5000 false Chr5: 23361004-23366003 Arabidopsis thaliana
AT5G57685 10.0kb upstream 10.0kb upstream 10864 true Chr5: 23366004-23376867 Arabidopsis thaliana
AT5G57685 10.0kb upstream 10.0kb upstream 10000 false Chr5: 23366868-23376867 Arabidopsis thaliana
AT5G57685 10.0kb downstream 10.0kb downstream 10864 true Chr5: 23356004-23366867 Arabidopsis thaliana
AT5G57685 10.0kb downstream 10.0kb downstream 10000 false Chr5: 23356004-23366003 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370426 5261 Brassicaceae View MSA
123837980 5264 Brassicales-Malvales View MSA
124350031 5266 SBM View MSA
124253904 5268 Malvidae View MSA
124063553 5270 Rosid View MSA
123752792 5271 Pentapetalae View MSA
122796809 5272 Eudicot View MSA
122048439 5273 Angiosperm View MSA
121310974 5274 Embryophyte View MSA
123348338 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.413        
cufflinks 104.568     High  
cufflinks 5.221       Low
cufflinks 139.945     High High
cufflinks 6.888        
cufflinks 98.737     High  

0 Strain