Gene : AT5G59570 A. thaliana TAIR10
Defline:  (1 of 3) PTHR31442//PTHR31442:SF6 - FAMILY NOT NAMED // DNA-BINDING DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  5453
Name:  ? AT5G59570 Secondary Identifier:  ? PAC:19669635
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G59570 0.5kb upstream 0.5kb upstream 2125 true Chr5: 24003388-24005512 Arabidopsis thaliana
AT5G59570 0.5kb upstream 0.5kb upstream 500 false Chr5: 24003388-24003887 Arabidopsis thaliana
AT5G59570 0.5kb downstream 0.5kb downstream 2125 true Chr5: 24003888-24006012 Arabidopsis thaliana
AT5G59570 0.5kb downstream 0.5kb downstream 500 false Chr5: 24005513-24006012 Arabidopsis thaliana
AT5G59570 1.0kb upstream 1.0kb upstream 2625 true Chr5: 24002888-24005512 Arabidopsis thaliana
AT5G59570 1.0kb upstream 1.0kb upstream 1000 false Chr5: 24002888-24003887 Arabidopsis thaliana
AT5G59570 1.0kb downstream 1.0kb downstream 2625 true Chr5: 24003888-24006512 Arabidopsis thaliana
AT5G59570 1.0kb downstream 1.0kb downstream 1000 false Chr5: 24005513-24006512 Arabidopsis thaliana
AT5G59570 2.0kb upstream 2.0kb upstream 3625 true Chr5: 24001888-24005512 Arabidopsis thaliana
AT5G59570 2.0kb upstream 2.0kb upstream 2000 false Chr5: 24001888-24003887 Arabidopsis thaliana
AT5G59570 2.0kb downstream 2.0kb downstream 3625 true Chr5: 24003888-24007512 Arabidopsis thaliana
AT5G59570 2.0kb downstream 2.0kb downstream 2000 false Chr5: 24005513-24007512 Arabidopsis thaliana
AT5G59570 5.0kb upstream 5.0kb upstream 6625 true Chr5: 23998888-24005512 Arabidopsis thaliana
AT5G59570 5.0kb upstream 5.0kb upstream 5000 false Chr5: 23998888-24003887 Arabidopsis thaliana
AT5G59570 5.0kb downstream 5.0kb downstream 6625 true Chr5: 24003888-24010512 Arabidopsis thaliana
AT5G59570 5.0kb downstream 5.0kb downstream 5000 false Chr5: 24005513-24010512 Arabidopsis thaliana
AT5G59570 10.0kb upstream 10.0kb upstream 11625 true Chr5: 23993888-24005512 Arabidopsis thaliana
AT5G59570 10.0kb upstream 10.0kb upstream 10000 false Chr5: 23993888-24003887 Arabidopsis thaliana
AT5G59570 10.0kb downstream 10.0kb downstream 11625 true Chr5: 24003888-24015512 Arabidopsis thaliana
AT5G59570 10.0kb downstream 10.0kb downstream 10000 false Chr5: 24005513-24015512 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343439 5261 Brassicaceae View MSA
123783639 5264 Brassicales-Malvales View MSA
124281860 5266 SBM View MSA
124136543 5268 Malvidae View MSA
124067582 5270 Rosid View MSA
123746852 5271 Pentapetalae View MSA
122794085 5272 Eudicot View MSA
122048998 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121350891 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.227        
cufflinks 12.372        
cufflinks 7.555        
cufflinks 8.22        
cufflinks 3.09       Low
cufflinks 10.759        

0 Strain