Gene : RTFL5 A. thaliana TAIR10
Primary Identifier:  ? AT5G59510 Defline:  (1 of 4) PTHR33102//PTHR33102:SF3 - FAMILY NOT NAMED // DVL13-RELATED
Genomic Order:  5447 Name:  ? AT5G59510
Secondary Identifier:  ? PAC:19670110
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G59510 0.5kb upstream 0.5kb upstream 1123 true Chr5: 23989574-23990696 Arabidopsis thaliana
AT5G59510 0.5kb upstream 0.5kb upstream 500 false Chr5: 23989574-23990073 Arabidopsis thaliana
AT5G59510 0.5kb downstream 0.5kb downstream 1123 true Chr5: 23990074-23991196 Arabidopsis thaliana
AT5G59510 0.5kb downstream 0.5kb downstream 500 false Chr5: 23990697-23991196 Arabidopsis thaliana
AT5G59510 1.0kb upstream 1.0kb upstream 1623 true Chr5: 23989074-23990696 Arabidopsis thaliana
AT5G59510 1.0kb upstream 1.0kb upstream 1000 false Chr5: 23989074-23990073 Arabidopsis thaliana
AT5G59510 1.0kb downstream 1.0kb downstream 1623 true Chr5: 23990074-23991696 Arabidopsis thaliana
AT5G59510 1.0kb downstream 1.0kb downstream 1000 false Chr5: 23990697-23991696 Arabidopsis thaliana
AT5G59510 2.0kb upstream 2.0kb upstream 2623 true Chr5: 23988074-23990696 Arabidopsis thaliana
AT5G59510 2.0kb upstream 2.0kb upstream 2000 false Chr5: 23988074-23990073 Arabidopsis thaliana
AT5G59510 2.0kb downstream 2.0kb downstream 2623 true Chr5: 23990074-23992696 Arabidopsis thaliana
AT5G59510 2.0kb downstream 2.0kb downstream 2000 false Chr5: 23990697-23992696 Arabidopsis thaliana
AT5G59510 5.0kb upstream 5.0kb upstream 5623 true Chr5: 23985074-23990696 Arabidopsis thaliana
AT5G59510 5.0kb upstream 5.0kb upstream 5000 false Chr5: 23985074-23990073 Arabidopsis thaliana
AT5G59510 5.0kb downstream 5.0kb downstream 5623 true Chr5: 23990074-23995696 Arabidopsis thaliana
AT5G59510 5.0kb downstream 5.0kb downstream 5000 false Chr5: 23990697-23995696 Arabidopsis thaliana
AT5G59510 10.0kb upstream 10.0kb upstream 10623 true Chr5: 23980074-23990696 Arabidopsis thaliana
AT5G59510 10.0kb upstream 10.0kb upstream 10000 false Chr5: 23980074-23990073 Arabidopsis thaliana
AT5G59510 10.0kb downstream 10.0kb downstream 10623 true Chr5: 23990074-24000696 Arabidopsis thaliana
AT5G59510 10.0kb downstream 10.0kb downstream 10000 false Chr5: 23990697-24000696 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378527 5261 Brassicaceae View MSA
123801899 5264 Brassicales-Malvales View MSA
124299149 5266 SBM View MSA
124150639 5268 Malvidae View MSA
123876220 5270 Rosid View MSA
123751653 5271 Pentapetalae View MSA
122795798 5272 Eudicot View MSA
122048565 5273 Angiosperm View MSA
121346075 5274 Embryophyte View MSA
123380321 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.316       Low
cufflinks 1.893        
cufflinks 3.409        
cufflinks 4.036        
cufflinks 1.413        
cufflinks 2.909        

0 Strain