Gene : AT5G58620 A. thaliana TAIR10
Defline:  (1 of 1) PTHR14493//PTHR14493:SF54 - UNCHARACTERIZED // ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 66 Genomic Order:  5354
Name:  ? AT5G58620 Secondary Identifier:  ? PAC:19665770
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G58620 0.5kb upstream 0.5kb upstream 3383 true Chr5: 23692840-23696222 Arabidopsis thaliana
AT5G58620 0.5kb upstream 0.5kb upstream 500 false Chr5: 23692840-23693339 Arabidopsis thaliana
AT5G58620 0.5kb downstream 0.5kb downstream 3383 true Chr5: 23693340-23696722 Arabidopsis thaliana
AT5G58620 0.5kb downstream 0.5kb downstream 500 false Chr5: 23696223-23696722 Arabidopsis thaliana
AT5G58620 1.0kb upstream 1.0kb upstream 3883 true Chr5: 23692340-23696222 Arabidopsis thaliana
AT5G58620 1.0kb upstream 1.0kb upstream 1000 false Chr5: 23692340-23693339 Arabidopsis thaliana
AT5G58620 1.0kb downstream 1.0kb downstream 3883 true Chr5: 23693340-23697222 Arabidopsis thaliana
AT5G58620 1.0kb downstream 1.0kb downstream 1000 false Chr5: 23696223-23697222 Arabidopsis thaliana
AT5G58620 2.0kb upstream 2.0kb upstream 4883 true Chr5: 23691340-23696222 Arabidopsis thaliana
AT5G58620 2.0kb upstream 2.0kb upstream 2000 false Chr5: 23691340-23693339 Arabidopsis thaliana
AT5G58620 2.0kb downstream 2.0kb downstream 4883 true Chr5: 23693340-23698222 Arabidopsis thaliana
AT5G58620 2.0kb downstream 2.0kb downstream 2000 false Chr5: 23696223-23698222 Arabidopsis thaliana
AT5G58620 5.0kb upstream 5.0kb upstream 7883 true Chr5: 23688340-23696222 Arabidopsis thaliana
AT5G58620 5.0kb upstream 5.0kb upstream 5000 false Chr5: 23688340-23693339 Arabidopsis thaliana
AT5G58620 5.0kb downstream 5.0kb downstream 7883 true Chr5: 23693340-23701222 Arabidopsis thaliana
AT5G58620 5.0kb downstream 5.0kb downstream 5000 false Chr5: 23696223-23701222 Arabidopsis thaliana
AT5G58620 10.0kb upstream 10.0kb upstream 12883 true Chr5: 23683340-23696222 Arabidopsis thaliana
AT5G58620 10.0kb upstream 10.0kb upstream 10000 false Chr5: 23683340-23693339 Arabidopsis thaliana
AT5G58620 10.0kb downstream 10.0kb downstream 12883 true Chr5: 23693340-23706222 Arabidopsis thaliana
AT5G58620 10.0kb downstream 10.0kb downstream 10000 false Chr5: 23696223-23706222 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374405 5261 Brassicaceae View MSA
123840721 5264 Brassicales-Malvales View MSA
124351100 5266 SBM View MSA
124251522 5268 Malvidae View MSA
124066606 5270 Rosid View MSA
123753423 5271 Pentapetalae View MSA
122793628 5272 Eudicot View MSA
122049418 5273 Angiosperm View MSA
123429052 5275 Viridiplantae View MSA
121351105 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.303        
cufflinks 23.779        
cufflinks 7.699        
cufflinks 25.29        
cufflinks 6.266       Low
cufflinks 22.595        

0 Strain