Protein Family : zinc finger (CCCH-type) family protein 124251522

Method ID:  5268 Method Name:  Malvidae
Sequence Alignment:  View MSA Member Count:  55

55 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29681.t000063 (1 of 2) PTHR14493//PTHR14493:SF54 - UNCHARACTERIZED // ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 66 R. communis v0.1 3374   29681: 315431-318804
orange1.1g006236m.g (1 of 1) PTHR14493:SF51 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 29-RELATED C. sinensis v1.1 2739   scaffold00021: 420048-422786
orange1.1g005270m.g (1 of 1) PTHR14493:SF54 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 66 C. sinensis v1.1 3409   scaffold00026: 682425-685833
AT5G58620 (1 of 1) PTHR14493//PTHR14493:SF54 - UNCHARACTERIZED // ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 66 A. thaliana TAIR10 2883   Chr5: 23693340-23696222
AT3G55980 (1 of 2) PTHR14493:SF51 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 29-RELATED A. thaliana TAIR10 SZF1 2548   Chr3: 20776295-20778842
AT2G40140 (1 of 2) PTHR14493:SF51 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 29-RELATED A. thaliana TAIR10 CZF1 2585   Chr2: 16772073-16774657
Thhalv10016372m.g (1 of 2) PTHR14493:SF51 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 29-RELATED E. salsugineum v1.0 2949   scaffold_10: 10641005-10643953
Thhalv10005860m.g (1 of 2) PTHR14493:SF51 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 29-RELATED E. salsugineum v1.0 2515   scaffold_19: 2734043-2736557
Thhalv10012984m.g (1 of 1) PTHR14493:SF54 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 66 E. salsugineum v1.0 2522   scaffold_2: 8792690-8795211
Ciclev10027883m.g (1 of 1) PTHR14493:SF54 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 66 C. clementina v1.0 3368   scaffold_8: 24493273-24496640
Ciclev10030920m.g (1 of 1) PTHR14493:SF51 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 29-RELATED C. clementina v1.0 3146   scaffold_4: 1277011-1280156
Lus10007493.g (1 of 2) PTHR14493:SF51 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 29-RELATED L. usitatissimum v1.0 1941   scaffold1519: 108613-110553
Lus10028970.g (1 of 2) PTHR14493:SF51 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 29-RELATED L. usitatissimum v1.0 1944   scaffold540: 1077330-1079273
Gorai.001G116400 (1 of 2) PF00642//PF13637 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) // Ankyrin repeats (many copies) (Ank_4) G. raimondii v2.1 3423   Chr01: 13869877-13873299
Gorai.013G017600 (1 of 3) PTHR14493:SF51 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 29-RELATED G. raimondii v2.1 2852   Chr13: 1213261-1216112
Gorai.009G091200 (1 of 2) PF00642//PF13637 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) // Ankyrin repeats (many copies) (Ank_4) G. raimondii v2.1 3277   Chr09: 6649041-6652317
Gorai.010G196500 (1 of 3) PTHR14493:SF51 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 29-RELATED G. raimondii v2.1 3003   Chr10: 55713031-55716033
Gorai.011G289400 (1 of 3) PTHR14493:SF51 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 29-RELATED G. raimondii v2.1 3245   Chr11: 62095144-62098388
Thecc1EG042489 (1 of 1) PTHR14493:SF51 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 29-RELATED T. cacao v1.1 3997   scaffold_10r: 771904-775900
Thecc1EG041605 (1 of 2) PTHR14493//PTHR14493:SF54 - UNCHARACTERIZED // ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 66 T. cacao v1.1 3679   scaffold_9: 38697953-38701631
Araha.5856s0005 (1 of 1) PTHR14493:SF54 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 66 A. halleri v1.1 2758   Scaffold5856: 9326-12083
Araha.26365s0002 (1 of 2) PTHR14493:SF51 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 29-RELATED A. halleri v1.1 1884   Scaffold26365: 21019-22902
Araha.32835s0001 (1 of 2) PTHR14493:SF51 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 29-RELATED A. halleri v1.1 1302   Scaffold32835: 14-1315
Cagra.0891s0057 (1 of 1) PTHR14493:SF54 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 66 C. grandiflora v1.1 2912   Scaffold891: 207977-210888
Cagra.0925s0010 (1 of 2) PTHR14493:SF51 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 29-RELATED C. grandiflora v1.1 2490   Scaffold925: 45897-48386
Cagra.2495s0002 (1 of 2) PTHR14493:SF51 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 29-RELATED C. grandiflora v1.1 2622   Scaffold2495: 2784-5405
Brara.E00566 (1 of 1) PF00642//PF13637 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) // Ankyrin repeats (many copies) (Ank_4) B. rapa FPsc v1.3 2417   A05: 3121691-3124107
Brara.I03841 (1 of 3) PTHR14493:SF51 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 29-RELATED B. rapa FPsc v1.3 2213   A09: 35262879-35265091
Brara.J01249 (1 of 1) PTHR14493:SF54 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 66 B. rapa FPsc v1.3 2679   A10: 11539814-11542492
Brara.C02058 (1 of 3) PTHR14493:SF51 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 29-RELATED B. rapa FPsc v1.3 2231   A03: 10250399-10252629

55 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
29681.m001358 R. communis v0.1 124251522 zinc finger (CCCH-type) family protein 1 5268 Malvidae
orange1.1g005270m C. sinensis v1.1 124251522 zinc finger (CCCH-type) family protein 2 5268 Malvidae
Ciclev10030920m C. clementina v1.0 124251522 zinc finger (CCCH-type) family protein 2 5268 Malvidae
Ciclev10027883m C. clementina v1.0 124251522 zinc finger (CCCH-type) family protein 2 5268 Malvidae
Lus10007493 L. usitatissimum v1.0 124251522 zinc finger (CCCH-type) family protein 2 5268 Malvidae
Lus10028970 L. usitatissimum v1.0 124251522 zinc finger (CCCH-type) family protein 2 5268 Malvidae
Gorai.009G091200.1 G. raimondii v2.1 124251522 zinc finger (CCCH-type) family protein 5 5268 Malvidae
Gorai.001G116400.1 G. raimondii v2.1 124251522 zinc finger (CCCH-type) family protein 5 5268 Malvidae
Thecc1EG042489t1 T. cacao v1.1 124251522 zinc finger (CCCH-type) family protein 2 5268 Malvidae
Cagra.0925s0010.1.p C. grandiflora v1.1 124251522 zinc finger (CCCH-type) family protein 3 5268 Malvidae
Bostr.26833s0388.1.p B. stricta v1.2 124251522 zinc finger (CCCH-type) family protein 3 5268 Malvidae
SapurV1A.0999s0030.1.p S. purpurea v1.0 124251522 zinc finger (CCCH-type) family protein 4 5268 Malvidae
SapurV1A.0077s0180.1.p S. purpurea v1.0 124251522 zinc finger (CCCH-type) family protein 4 5268 Malvidae
Manes.10G011700.1.p M. esculenta v6.1 124251522 zinc finger (CCCH-type) family protein 4 5268 Malvidae
Potri.010G187900.1.p P. trichocarpa v3.1 124251522 zinc finger (CCCH-type) family protein 4 5268 Malvidae
Potri.009G046800.1.p P. trichocarpa v3.1 124251522 zinc finger (CCCH-type) family protein 4 5268 Malvidae
Podel.10G190500.1.p P. deltoides WV94 v2.1 124251522 zinc finger (CCCH-type) family protein 4 5268 Malvidae
orange1.1g006236m C. sinensis v1.1 124251522 zinc finger (CCCH-type) family protein 2 5268 Malvidae
AT2G40140.1 A. thaliana TAIR10 124251522 zinc finger (CCCH-type) family protein 3 5268 Malvidae
AT3G55980.1 A. thaliana TAIR10 124251522 zinc finger (CCCH-type) family protein 3 5268 Malvidae
AT5G58620.1 A. thaliana TAIR10 124251522 zinc finger (CCCH-type) family protein 3 5268 Malvidae
Thhalv10005860m E. salsugineum v1.0 124251522 zinc finger (CCCH-type) family protein 3 5268 Malvidae
Thhalv10012984m E. salsugineum v1.0 124251522 zinc finger (CCCH-type) family protein 3 5268 Malvidae
Thhalv10016372m E. salsugineum v1.0 124251522 zinc finger (CCCH-type) family protein 3 5268 Malvidae
Gorai.013G017600.1 G. raimondii v2.1 124251522 zinc finger (CCCH-type) family protein 5 5268 Malvidae
Gorai.010G196500.1 G. raimondii v2.1 124251522 zinc finger (CCCH-type) family protein 5 5268 Malvidae
Gorai.011G289400.1 G. raimondii v2.1 124251522 zinc finger (CCCH-type) family protein 5 5268 Malvidae
Thecc1EG041605t1 T. cacao v1.1 124251522 zinc finger (CCCH-type) family protein 2 5268 Malvidae
Araha.5856s0005.1.p A. halleri v1.1 124251522 zinc finger (CCCH-type) family protein 3 5268 Malvidae
Araha.26365s0002.1.p A. halleri v1.1 124251522 zinc finger (CCCH-type) family protein 3 5268 Malvidae