Gene : CZF1 A. thaliana TAIR10
Primary Identifier:  ? AT2G40140 Defline:  (1 of 2) PTHR14493:SF51 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 29-RELATED
Genomic Order:  3393 Name:  ? AT2G40140
Secondary Identifier:  ? PAC:19642704
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Expression

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4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G40140 0.5kb upstream 0.5kb upstream 3085 true Chr2: 16771573-16774657 Arabidopsis thaliana
AT2G40140 0.5kb upstream 0.5kb upstream 500 false Chr2: 16771573-16772072 Arabidopsis thaliana
AT2G40140 0.5kb downstream 0.5kb downstream 3085 true Chr2: 16772073-16775157 Arabidopsis thaliana
AT2G40140 0.5kb downstream 0.5kb downstream 500 false Chr2: 16774658-16775157 Arabidopsis thaliana
AT2G40140 1.0kb upstream 1.0kb upstream 3585 true Chr2: 16771073-16774657 Arabidopsis thaliana
AT2G40140 1.0kb upstream 1.0kb upstream 1000 false Chr2: 16771073-16772072 Arabidopsis thaliana
AT2G40140 1.0kb downstream 1.0kb downstream 3585 true Chr2: 16772073-16775657 Arabidopsis thaliana
AT2G40140 1.0kb downstream 1.0kb downstream 1000 false Chr2: 16774658-16775657 Arabidopsis thaliana
AT2G40140 2.0kb upstream 2.0kb upstream 4585 true Chr2: 16770073-16774657 Arabidopsis thaliana
AT2G40140 2.0kb upstream 2.0kb upstream 2000 false Chr2: 16770073-16772072 Arabidopsis thaliana
AT2G40140 2.0kb downstream 2.0kb downstream 4585 true Chr2: 16772073-16776657 Arabidopsis thaliana
AT2G40140 2.0kb downstream 2.0kb downstream 2000 false Chr2: 16774658-16776657 Arabidopsis thaliana
AT2G40140 5.0kb upstream 5.0kb upstream 7585 true Chr2: 16767073-16774657 Arabidopsis thaliana
AT2G40140 5.0kb upstream 5.0kb upstream 5000 false Chr2: 16767073-16772072 Arabidopsis thaliana
AT2G40140 5.0kb downstream 5.0kb downstream 7585 true Chr2: 16772073-16779657 Arabidopsis thaliana
AT2G40140 5.0kb downstream 5.0kb downstream 5000 false Chr2: 16774658-16779657 Arabidopsis thaliana
AT2G40140 10.0kb upstream 10.0kb upstream 12585 true Chr2: 16762073-16774657 Arabidopsis thaliana
AT2G40140 10.0kb upstream 10.0kb upstream 10000 false Chr2: 16762073-16772072 Arabidopsis thaliana
AT2G40140 10.0kb downstream 10.0kb downstream 12585 true Chr2: 16772073-16784657 Arabidopsis thaliana
AT2G40140 10.0kb downstream 10.0kb downstream 10000 false Chr2: 16774658-16784657 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365579 5261 Brassicaceae View MSA
123840721 5264 Brassicales-Malvales View MSA
124351100 5266 SBM View MSA
124251522 5268 Malvidae View MSA
124066606 5270 Rosid View MSA
123753423 5271 Pentapetalae View MSA
122793628 5272 Eudicot View MSA
122049418 5273 Angiosperm View MSA
123429052 5275 Viridiplantae View MSA
121351105 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.184        
cufflinks 71.954     High  
cufflinks 21.366        
cufflinks 70.442     High  
cufflinks 14.056       Low
cufflinks 59.662     High  

0 Strain