Gene : PLC1 A. thaliana TAIR10
Primary Identifier:  ? AT5G58670 Defline:  (1 of 2) PTHR10336:SF105 - PHOSPHOINOSITIDE PHOSPHOLIPASE C 1-RELATED
Genomic Order:  5359 Name:  ? AT5G58670
Secondary Identifier:  ? PAC:19669559
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana LIPASYN-PWY Arabidopsis thaliana pathologic  
Athaliana PWY-6351 Arabidopsis thaliana pathologic  
Athaliana PWY-6367 Arabidopsis thaliana pathologic  
Athaliana PWY-7039 Arabidopsis thaliana pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G58670 0.5kb upstream 0.5kb upstream 3070 true Chr5: 23704231-23707300 Arabidopsis thaliana
AT5G58670 0.5kb upstream 0.5kb upstream 500 false Chr5: 23706801-23707300 Arabidopsis thaliana
AT5G58670 0.5kb downstream 0.5kb downstream 3070 true Chr5: 23703731-23706800 Arabidopsis thaliana
AT5G58670 0.5kb downstream 0.5kb downstream 500 false Chr5: 23703731-23704230 Arabidopsis thaliana
AT5G58670 1.0kb upstream 1.0kb upstream 3570 true Chr5: 23704231-23707800 Arabidopsis thaliana
AT5G58670 1.0kb upstream 1.0kb upstream 1000 false Chr5: 23706801-23707800 Arabidopsis thaliana
AT5G58670 1.0kb downstream 1.0kb downstream 3570 true Chr5: 23703231-23706800 Arabidopsis thaliana
AT5G58670 1.0kb downstream 1.0kb downstream 1000 false Chr5: 23703231-23704230 Arabidopsis thaliana
AT5G58670 2.0kb upstream 2.0kb upstream 4570 true Chr5: 23704231-23708800 Arabidopsis thaliana
AT5G58670 2.0kb upstream 2.0kb upstream 2000 false Chr5: 23706801-23708800 Arabidopsis thaliana
AT5G58670 2.0kb downstream 2.0kb downstream 4570 true Chr5: 23702231-23706800 Arabidopsis thaliana
AT5G58670 2.0kb downstream 2.0kb downstream 2000 false Chr5: 23702231-23704230 Arabidopsis thaliana
AT5G58670 5.0kb upstream 5.0kb upstream 7570 true Chr5: 23704231-23711800 Arabidopsis thaliana
AT5G58670 5.0kb upstream 5.0kb upstream 5000 false Chr5: 23706801-23711800 Arabidopsis thaliana
AT5G58670 5.0kb downstream 5.0kb downstream 7570 true Chr5: 23699231-23706800 Arabidopsis thaliana
AT5G58670 5.0kb downstream 5.0kb downstream 5000 false Chr5: 23699231-23704230 Arabidopsis thaliana
AT5G58670 10.0kb upstream 10.0kb upstream 12570 true Chr5: 23704231-23716800 Arabidopsis thaliana
AT5G58670 10.0kb upstream 10.0kb upstream 10000 false Chr5: 23706801-23716800 Arabidopsis thaliana
AT5G58670 10.0kb downstream 10.0kb downstream 12570 true Chr5: 23694231-23706800 Arabidopsis thaliana
AT5G58670 10.0kb downstream 10.0kb downstream 10000 false Chr5: 23694231-23704230 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121792751 5273 Angiosperm View MSA
122363671 5261 Brassicaceae View MSA
123835574 5264 Brassicales-Malvales View MSA
124349401 5266 SBM View MSA
124246410 5268 Malvidae View MSA
124071681 5270 Rosid View MSA
123628037 5271 Pentapetalae View MSA
122798488 5272 Eudicot View MSA
121351735 5274 Embryophyte View MSA
123428200 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 53.467     High  
cufflinks 106.977     High High
cufflinks 26.295     High Low
cufflinks 90.991     High  
cufflinks 32.772     High  
cufflinks 84.794     High  

0 Strain