Gene : AT5G60510 A. thaliana TAIR10
Defline:  (1 of 1) PTHR10291//PTHR10291:SF0 - DEHYDRODOLICHYL DIPHOSPHATE SYNTHASE // DEHYDRODOLICHYL DIPHOSPHATE SYNTHASE Genomic Order:  5548
Name:  ? AT5G60510 Secondary Identifier:  ? PAC:19670824
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-5815 Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G60510 0.5kb upstream 0.5kb upstream 1931 true Chr5: 24329838-24331768 Arabidopsis thaliana
AT5G60510 0.5kb upstream 0.5kb upstream 500 false Chr5: 24329838-24330337 Arabidopsis thaliana
AT5G60510 0.5kb downstream 0.5kb downstream 1931 true Chr5: 24330338-24332268 Arabidopsis thaliana
AT5G60510 0.5kb downstream 0.5kb downstream 500 false Chr5: 24331769-24332268 Arabidopsis thaliana
AT5G60510 1.0kb upstream 1.0kb upstream 2431 true Chr5: 24329338-24331768 Arabidopsis thaliana
AT5G60510 1.0kb upstream 1.0kb upstream 1000 false Chr5: 24329338-24330337 Arabidopsis thaliana
AT5G60510 1.0kb downstream 1.0kb downstream 2431 true Chr5: 24330338-24332768 Arabidopsis thaliana
AT5G60510 1.0kb downstream 1.0kb downstream 1000 false Chr5: 24331769-24332768 Arabidopsis thaliana
AT5G60510 2.0kb upstream 2.0kb upstream 3431 true Chr5: 24328338-24331768 Arabidopsis thaliana
AT5G60510 2.0kb upstream 2.0kb upstream 2000 false Chr5: 24328338-24330337 Arabidopsis thaliana
AT5G60510 2.0kb downstream 2.0kb downstream 3431 true Chr5: 24330338-24333768 Arabidopsis thaliana
AT5G60510 2.0kb downstream 2.0kb downstream 2000 false Chr5: 24331769-24333768 Arabidopsis thaliana
AT5G60510 5.0kb upstream 5.0kb upstream 6431 true Chr5: 24325338-24331768 Arabidopsis thaliana
AT5G60510 5.0kb upstream 5.0kb upstream 5000 false Chr5: 24325338-24330337 Arabidopsis thaliana
AT5G60510 5.0kb downstream 5.0kb downstream 6431 true Chr5: 24330338-24336768 Arabidopsis thaliana
AT5G60510 5.0kb downstream 5.0kb downstream 5000 false Chr5: 24331769-24336768 Arabidopsis thaliana
AT5G60510 10.0kb upstream 10.0kb upstream 11431 true Chr5: 24320338-24331768 Arabidopsis thaliana
AT5G60510 10.0kb upstream 10.0kb upstream 10000 false Chr5: 24320338-24330337 Arabidopsis thaliana
AT5G60510 10.0kb downstream 10.0kb downstream 11431 true Chr5: 24330338-24341768 Arabidopsis thaliana
AT5G60510 10.0kb downstream 10.0kb downstream 10000 false Chr5: 24331769-24341768 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370926 5261 Brassicaceae View MSA
123839607 5264 Brassicales-Malvales View MSA
124351128 5266 SBM View MSA
124244449 5268 Malvidae View MSA
124070400 5270 Rosid View MSA
123753715 5271 Pentapetalae View MSA
122795896 5272 Eudicot View MSA
122049873 5273 Angiosperm View MSA
121349663 5274 Embryophyte View MSA
123426106 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.221     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.043     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain