Gene : AT5G61990 A. thaliana TAIR10
Defline:  (1 of 4) K17964 - leucine-rich PPR motif-containing protein, mitochondrial (LRPPRC) Genomic Order:  5704
Name:  ? AT5G61990 Secondary Identifier:  ? PAC:19672585
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G61990 0.5kb upstream 0.5kb upstream 4012 true Chr5: 24899606-24903617 Arabidopsis thaliana
AT5G61990 0.5kb upstream 0.5kb upstream 500 false Chr5: 24903118-24903617 Arabidopsis thaliana
AT5G61990 0.5kb downstream 0.5kb downstream 4012 true Chr5: 24899106-24903117 Arabidopsis thaliana
AT5G61990 0.5kb downstream 0.5kb downstream 500 false Chr5: 24899106-24899605 Arabidopsis thaliana
AT5G61990 1.0kb upstream 1.0kb upstream 4512 true Chr5: 24899606-24904117 Arabidopsis thaliana
AT5G61990 1.0kb upstream 1.0kb upstream 1000 false Chr5: 24903118-24904117 Arabidopsis thaliana
AT5G61990 1.0kb downstream 1.0kb downstream 4512 true Chr5: 24898606-24903117 Arabidopsis thaliana
AT5G61990 1.0kb downstream 1.0kb downstream 1000 false Chr5: 24898606-24899605 Arabidopsis thaliana
AT5G61990 2.0kb upstream 2.0kb upstream 5512 true Chr5: 24899606-24905117 Arabidopsis thaliana
AT5G61990 2.0kb upstream 2.0kb upstream 2000 false Chr5: 24903118-24905117 Arabidopsis thaliana
AT5G61990 2.0kb downstream 2.0kb downstream 5512 true Chr5: 24897606-24903117 Arabidopsis thaliana
AT5G61990 2.0kb downstream 2.0kb downstream 2000 false Chr5: 24897606-24899605 Arabidopsis thaliana
AT5G61990 5.0kb upstream 5.0kb upstream 8512 true Chr5: 24899606-24908117 Arabidopsis thaliana
AT5G61990 5.0kb upstream 5.0kb upstream 5000 false Chr5: 24903118-24908117 Arabidopsis thaliana
AT5G61990 5.0kb downstream 5.0kb downstream 8512 true Chr5: 24894606-24903117 Arabidopsis thaliana
AT5G61990 5.0kb downstream 5.0kb downstream 5000 false Chr5: 24894606-24899605 Arabidopsis thaliana
AT5G61990 10.0kb upstream 10.0kb upstream 13512 true Chr5: 24899606-24913117 Arabidopsis thaliana
AT5G61990 10.0kb upstream 10.0kb upstream 10000 false Chr5: 24903118-24913117 Arabidopsis thaliana
AT5G61990 10.0kb downstream 10.0kb downstream 13512 true Chr5: 24889606-24903117 Arabidopsis thaliana
AT5G61990 10.0kb downstream 10.0kb downstream 10000 false Chr5: 24889606-24899605 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369218 5261 Brassicaceae View MSA
123829727 5264 Brassicales-Malvales View MSA
124337622 5266 SBM View MSA
124254642 5268 Malvidae View MSA
124074430 5270 Rosid View MSA
123753756 5271 Pentapetalae View MSA
122797794 5272 Eudicot View MSA
122051419 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.271       Low
cufflinks 5.68       High
cufflinks 4.453        
cufflinks 5.718       High
cufflinks 4.144        
cufflinks 4.456        

0 Strain