Gene : ATG3 A. thaliana TAIR10
Primary Identifier:  ? AT5G61500 Defline:  (1 of 1) K08343 - ubiquitin-like-conjugating enzyme ATG3 (ATG3)
Genomic Order:  5655 Name:  ? AT5G61500
Secondary Identifier:  ? PAC:19672532
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G61500 0.5kb upstream 0.5kb upstream 3569 true Chr5: 24733785-24737353 Arabidopsis thaliana
AT5G61500 0.5kb upstream 0.5kb upstream 500 false Chr5: 24736854-24737353 Arabidopsis thaliana
AT5G61500 0.5kb downstream 0.5kb downstream 3569 true Chr5: 24733285-24736853 Arabidopsis thaliana
AT5G61500 0.5kb downstream 0.5kb downstream 500 false Chr5: 24733285-24733784 Arabidopsis thaliana
AT5G61500 1.0kb upstream 1.0kb upstream 4069 true Chr5: 24733785-24737853 Arabidopsis thaliana
AT5G61500 1.0kb upstream 1.0kb upstream 1000 false Chr5: 24736854-24737853 Arabidopsis thaliana
AT5G61500 1.0kb downstream 1.0kb downstream 4069 true Chr5: 24732785-24736853 Arabidopsis thaliana
AT5G61500 1.0kb downstream 1.0kb downstream 1000 false Chr5: 24732785-24733784 Arabidopsis thaliana
AT5G61500 2.0kb upstream 2.0kb upstream 5069 true Chr5: 24733785-24738853 Arabidopsis thaliana
AT5G61500 2.0kb upstream 2.0kb upstream 2000 false Chr5: 24736854-24738853 Arabidopsis thaliana
AT5G61500 2.0kb downstream 2.0kb downstream 5069 true Chr5: 24731785-24736853 Arabidopsis thaliana
AT5G61500 2.0kb downstream 2.0kb downstream 2000 false Chr5: 24731785-24733784 Arabidopsis thaliana
AT5G61500 5.0kb upstream 5.0kb upstream 8069 true Chr5: 24733785-24741853 Arabidopsis thaliana
AT5G61500 5.0kb upstream 5.0kb upstream 5000 false Chr5: 24736854-24741853 Arabidopsis thaliana
AT5G61500 5.0kb downstream 5.0kb downstream 8069 true Chr5: 24728785-24736853 Arabidopsis thaliana
AT5G61500 5.0kb downstream 5.0kb downstream 5000 false Chr5: 24728785-24733784 Arabidopsis thaliana
AT5G61500 10.0kb upstream 10.0kb upstream 13069 true Chr5: 24733785-24746853 Arabidopsis thaliana
AT5G61500 10.0kb upstream 10.0kb upstream 10000 false Chr5: 24736854-24746853 Arabidopsis thaliana
AT5G61500 10.0kb downstream 10.0kb downstream 13069 true Chr5: 24723785-24736853 Arabidopsis thaliana
AT5G61500 10.0kb downstream 10.0kb downstream 10000 false Chr5: 24723785-24733784 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369043 5261 Brassicaceae View MSA
123831045 5264 Brassicales-Malvales View MSA
124350961 5266 SBM View MSA
124242414 5268 Malvidae View MSA
124064028 5270 Rosid View MSA
123743996 5271 Pentapetalae View MSA
122789041 5272 Eudicot View MSA
122041877 5273 Angiosperm View MSA
121349462 5274 Embryophyte View MSA
123426307 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.051        
cufflinks 18.371        
cufflinks 12.646       Low
cufflinks 20.114       High
cufflinks 14.767        
cufflinks 17.731        

0 Strain