Gene : OPT4 A. thaliana TAIR10
Primary Identifier:  ? AT5G64410 Defline:  (1 of 1) PTHR22601:SF11 - OLIGOPEPTIDE TRANSPORTER 4
Genomic Order:  5962 Name:  ? AT5G64410
Secondary Identifier:  ? PAC:19673145
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G64410 0.5kb upstream 0.5kb upstream 4708 true Chr5: 25750845-25755552 Arabidopsis thaliana
AT5G64410 0.5kb upstream 0.5kb upstream 500 false Chr5: 25755053-25755552 Arabidopsis thaliana
AT5G64410 0.5kb downstream 0.5kb downstream 4708 true Chr5: 25750345-25755052 Arabidopsis thaliana
AT5G64410 0.5kb downstream 0.5kb downstream 500 false Chr5: 25750345-25750844 Arabidopsis thaliana
AT5G64410 1.0kb upstream 1.0kb upstream 5208 true Chr5: 25750845-25756052 Arabidopsis thaliana
AT5G64410 1.0kb upstream 1.0kb upstream 1000 false Chr5: 25755053-25756052 Arabidopsis thaliana
AT5G64410 1.0kb downstream 1.0kb downstream 5208 true Chr5: 25749845-25755052 Arabidopsis thaliana
AT5G64410 1.0kb downstream 1.0kb downstream 1000 false Chr5: 25749845-25750844 Arabidopsis thaliana
AT5G64410 2.0kb upstream 2.0kb upstream 6208 true Chr5: 25750845-25757052 Arabidopsis thaliana
AT5G64410 2.0kb upstream 2.0kb upstream 2000 false Chr5: 25755053-25757052 Arabidopsis thaliana
AT5G64410 2.0kb downstream 2.0kb downstream 6208 true Chr5: 25748845-25755052 Arabidopsis thaliana
AT5G64410 2.0kb downstream 2.0kb downstream 2000 false Chr5: 25748845-25750844 Arabidopsis thaliana
AT5G64410 5.0kb upstream 5.0kb upstream 9208 true Chr5: 25750845-25760052 Arabidopsis thaliana
AT5G64410 5.0kb upstream 5.0kb upstream 5000 false Chr5: 25755053-25760052 Arabidopsis thaliana
AT5G64410 5.0kb downstream 5.0kb downstream 9208 true Chr5: 25745845-25755052 Arabidopsis thaliana
AT5G64410 5.0kb downstream 5.0kb downstream 5000 false Chr5: 25745845-25750844 Arabidopsis thaliana
AT5G64410 10.0kb upstream 10.0kb upstream 14208 true Chr5: 25750845-25765052 Arabidopsis thaliana
AT5G64410 10.0kb upstream 10.0kb upstream 10000 false Chr5: 25755053-25765052 Arabidopsis thaliana
AT5G64410 10.0kb downstream 10.0kb downstream 14208 true Chr5: 25740845-25755052 Arabidopsis thaliana
AT5G64410 10.0kb downstream 10.0kb downstream 10000 false Chr5: 25740845-25750844 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368517 5261 Brassicaceae View MSA
123828328 5264 Brassicales-Malvales View MSA
124336577 5266 SBM View MSA
124247375 5268 Malvidae View MSA
124072346 5270 Rosid View MSA
123738802 5271 Pentapetalae View MSA
122788637 5272 Eudicot View MSA
122046931 5273 Angiosperm View MSA
121351141 5274 Embryophyte View MSA
123382023 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.776        
cufflinks 11.161        
cufflinks 8.09       Low
cufflinks 11.978        
cufflinks 8.068       Low
cufflinks 13.267       High

0 Strain