Gene : MC3 A. thaliana TAIR10
Primary Identifier:  ? AT5G64240 Defline:  (1 of 1) PTHR31773//PTHR31773:SF6 - FAMILY NOT NAMED // METACASPASE-3
Genomic Order:  5940 Name:  ? AT5G64240
Secondary Identifier:  ? PAC:19665537
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G64240 0.5kb upstream 0.5kb upstream 2297 true Chr5: 25695120-25697416 Arabidopsis thaliana
AT5G64240 0.5kb upstream 0.5kb upstream 500 false Chr5: 25695120-25695619 Arabidopsis thaliana
AT5G64240 0.5kb downstream 0.5kb downstream 2297 true Chr5: 25695620-25697916 Arabidopsis thaliana
AT5G64240 0.5kb downstream 0.5kb downstream 500 false Chr5: 25697417-25697916 Arabidopsis thaliana
AT5G64240 1.0kb upstream 1.0kb upstream 2797 true Chr5: 25694620-25697416 Arabidopsis thaliana
AT5G64240 1.0kb upstream 1.0kb upstream 1000 false Chr5: 25694620-25695619 Arabidopsis thaliana
AT5G64240 1.0kb downstream 1.0kb downstream 2797 true Chr5: 25695620-25698416 Arabidopsis thaliana
AT5G64240 1.0kb downstream 1.0kb downstream 1000 false Chr5: 25697417-25698416 Arabidopsis thaliana
AT5G64240 2.0kb upstream 2.0kb upstream 3797 true Chr5: 25693620-25697416 Arabidopsis thaliana
AT5G64240 2.0kb upstream 2.0kb upstream 2000 false Chr5: 25693620-25695619 Arabidopsis thaliana
AT5G64240 2.0kb downstream 2.0kb downstream 3797 true Chr5: 25695620-25699416 Arabidopsis thaliana
AT5G64240 2.0kb downstream 2.0kb downstream 2000 false Chr5: 25697417-25699416 Arabidopsis thaliana
AT5G64240 5.0kb upstream 5.0kb upstream 6797 true Chr5: 25690620-25697416 Arabidopsis thaliana
AT5G64240 5.0kb upstream 5.0kb upstream 5000 false Chr5: 25690620-25695619 Arabidopsis thaliana
AT5G64240 5.0kb downstream 5.0kb downstream 6797 true Chr5: 25695620-25702416 Arabidopsis thaliana
AT5G64240 5.0kb downstream 5.0kb downstream 5000 false Chr5: 25697417-25702416 Arabidopsis thaliana
AT5G64240 10.0kb upstream 10.0kb upstream 11797 true Chr5: 25685620-25697416 Arabidopsis thaliana
AT5G64240 10.0kb upstream 10.0kb upstream 10000 false Chr5: 25685620-25695619 Arabidopsis thaliana
AT5G64240 10.0kb downstream 10.0kb downstream 11797 true Chr5: 25695620-25707416 Arabidopsis thaliana
AT5G64240 10.0kb downstream 10.0kb downstream 10000 false Chr5: 25697417-25707416 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379540 5261 Brassicaceae View MSA
123834783 5264 Brassicales-Malvales View MSA
124344945 5266 SBM View MSA
124253694 5268 Malvidae View MSA
124037273 5270 Rosid View MSA
123744103 5271 Pentapetalae View MSA
122795793 5272 Eudicot View MSA
122050099 5273 Angiosperm View MSA
123428899 5275 Viridiplantae View MSA
121348125 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.449        
cufflinks 27.57       High
cufflinks 14.499        
cufflinks 26.438       High
cufflinks 14.546        
cufflinks 12.335        

0 Strain