Gene : AT5G63380 A. thaliana TAIR10
Defline:  (1 of 1) PTHR24096//PTHR24096:SF251 - FAMILY NOT NAMED // 4-COUMARATE--COA LIGASE-LIKE 9 Genomic Order:  5852
Name:  ? AT5G63380 Secondary Identifier:  ? PAC:19672600
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G63380 0.5kb upstream 0.5kb upstream 3153 true Chr5: 25387411-25390563 Arabidopsis thaliana
AT5G63380 0.5kb upstream 0.5kb upstream 500 false Chr5: 25390064-25390563 Arabidopsis thaliana
AT5G63380 0.5kb downstream 0.5kb downstream 3153 true Chr5: 25386911-25390063 Arabidopsis thaliana
AT5G63380 0.5kb downstream 0.5kb downstream 500 false Chr5: 25386911-25387410 Arabidopsis thaliana
AT5G63380 1.0kb upstream 1.0kb upstream 3653 true Chr5: 25387411-25391063 Arabidopsis thaliana
AT5G63380 1.0kb upstream 1.0kb upstream 1000 false Chr5: 25390064-25391063 Arabidopsis thaliana
AT5G63380 1.0kb downstream 1.0kb downstream 3653 true Chr5: 25386411-25390063 Arabidopsis thaliana
AT5G63380 1.0kb downstream 1.0kb downstream 1000 false Chr5: 25386411-25387410 Arabidopsis thaliana
AT5G63380 2.0kb upstream 2.0kb upstream 4653 true Chr5: 25387411-25392063 Arabidopsis thaliana
AT5G63380 2.0kb upstream 2.0kb upstream 2000 false Chr5: 25390064-25392063 Arabidopsis thaliana
AT5G63380 2.0kb downstream 2.0kb downstream 4653 true Chr5: 25385411-25390063 Arabidopsis thaliana
AT5G63380 2.0kb downstream 2.0kb downstream 2000 false Chr5: 25385411-25387410 Arabidopsis thaliana
AT5G63380 5.0kb upstream 5.0kb upstream 7653 true Chr5: 25387411-25395063 Arabidopsis thaliana
AT5G63380 5.0kb upstream 5.0kb upstream 5000 false Chr5: 25390064-25395063 Arabidopsis thaliana
AT5G63380 5.0kb downstream 5.0kb downstream 7653 true Chr5: 25382411-25390063 Arabidopsis thaliana
AT5G63380 5.0kb downstream 5.0kb downstream 5000 false Chr5: 25382411-25387410 Arabidopsis thaliana
AT5G63380 10.0kb upstream 10.0kb upstream 12653 true Chr5: 25387411-25400063 Arabidopsis thaliana
AT5G63380 10.0kb upstream 10.0kb upstream 10000 false Chr5: 25390064-25400063 Arabidopsis thaliana
AT5G63380 10.0kb downstream 10.0kb downstream 12653 true Chr5: 25377411-25390063 Arabidopsis thaliana
AT5G63380 10.0kb downstream 10.0kb downstream 10000 false Chr5: 25377411-25387410 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364707 5261 Brassicaceae View MSA
123830191 5264 Brassicales-Malvales View MSA
124347461 5266 SBM View MSA
124250564 5268 Malvidae View MSA
124071918 5270 Rosid View MSA
123745043 5271 Pentapetalae View MSA
122795708 5272 Eudicot View MSA
122045138 5273 Angiosperm View MSA
121310405 5274 Embryophyte View MSA
123347895 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.739       Low
cufflinks 9.927        
cufflinks 9.409        
cufflinks 9.779        
cufflinks 8.281        
cufflinks 9.799        

0 Strain