Gene : AT5G65950 A. thaliana TAIR10
Defline:  (1 of 1) PTHR14374 - FOIE GRAS Genomic Order:  6133
Name:  ? AT5G65950 Secondary Identifier:  ? PAC:19668952
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G65950 0.5kb upstream 0.5kb upstream 5599 true Chr5: 26379623-26385221 Arabidopsis thaliana
AT5G65950 0.5kb upstream 0.5kb upstream 500 false Chr5: 26379623-26380122 Arabidopsis thaliana
AT5G65950 0.5kb downstream 0.5kb downstream 5599 true Chr5: 26380123-26385721 Arabidopsis thaliana
AT5G65950 0.5kb downstream 0.5kb downstream 500 false Chr5: 26385222-26385721 Arabidopsis thaliana
AT5G65950 1.0kb upstream 1.0kb upstream 6099 true Chr5: 26379123-26385221 Arabidopsis thaliana
AT5G65950 1.0kb upstream 1.0kb upstream 1000 false Chr5: 26379123-26380122 Arabidopsis thaliana
AT5G65950 1.0kb downstream 1.0kb downstream 6099 true Chr5: 26380123-26386221 Arabidopsis thaliana
AT5G65950 1.0kb downstream 1.0kb downstream 1000 false Chr5: 26385222-26386221 Arabidopsis thaliana
AT5G65950 2.0kb upstream 2.0kb upstream 7099 true Chr5: 26378123-26385221 Arabidopsis thaliana
AT5G65950 2.0kb upstream 2.0kb upstream 2000 false Chr5: 26378123-26380122 Arabidopsis thaliana
AT5G65950 2.0kb downstream 2.0kb downstream 7099 true Chr5: 26380123-26387221 Arabidopsis thaliana
AT5G65950 2.0kb downstream 2.0kb downstream 2000 false Chr5: 26385222-26387221 Arabidopsis thaliana
AT5G65950 5.0kb upstream 5.0kb upstream 10099 true Chr5: 26375123-26385221 Arabidopsis thaliana
AT5G65950 5.0kb upstream 5.0kb upstream 5000 false Chr5: 26375123-26380122 Arabidopsis thaliana
AT5G65950 5.0kb downstream 5.0kb downstream 10099 true Chr5: 26380123-26390221 Arabidopsis thaliana
AT5G65950 5.0kb downstream 5.0kb downstream 5000 false Chr5: 26385222-26390221 Arabidopsis thaliana
AT5G65950 10.0kb upstream 10.0kb upstream 15099 true Chr5: 26370123-26385221 Arabidopsis thaliana
AT5G65950 10.0kb upstream 10.0kb upstream 10000 false Chr5: 26370123-26380122 Arabidopsis thaliana
AT5G65950 10.0kb downstream 10.0kb downstream 15099 true Chr5: 26380123-26395221 Arabidopsis thaliana
AT5G65950 10.0kb downstream 10.0kb downstream 10000 false Chr5: 26385222-26395221 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373007 5261 Brassicaceae View MSA
123827740 5264 Brassicales-Malvales View MSA
124336499 5266 SBM View MSA
124241533 5268 Malvidae View MSA
124064805 5270 Rosid View MSA
123736762 5271 Pentapetalae View MSA
122791582 5272 Eudicot View MSA
122043312 5273 Angiosperm View MSA
121344213 5274 Embryophyte View MSA
123424379 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.535        
cufflinks 27.446        
cufflinks 16.651        
cufflinks 27.685        
cufflinks 16.679        
cufflinks 27.538        

0 Strain