Gene : GCL1 A. thaliana TAIR10
Primary Identifier:  ? AT5G65280 Defline:  (1 of 1) PTHR12736//PTHR12736:SF14 - LANC-LIKE PROTEIN // LANC-LIKE PROTEIN GCL1
Genomic Order:  6060 Name:  ? AT5G65280
Secondary Identifier:  ? PAC:19667652
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G65280 0.5kb upstream 0.5kb upstream 2681 true Chr5: 26085973-26088653 Arabidopsis thaliana
AT5G65280 0.5kb upstream 0.5kb upstream 500 false Chr5: 26088154-26088653 Arabidopsis thaliana
AT5G65280 0.5kb downstream 0.5kb downstream 2681 true Chr5: 26085473-26088153 Arabidopsis thaliana
AT5G65280 0.5kb downstream 0.5kb downstream 500 false Chr5: 26085473-26085972 Arabidopsis thaliana
AT5G65280 1.0kb upstream 1.0kb upstream 3181 true Chr5: 26085973-26089153 Arabidopsis thaliana
AT5G65280 1.0kb upstream 1.0kb upstream 1000 false Chr5: 26088154-26089153 Arabidopsis thaliana
AT5G65280 1.0kb downstream 1.0kb downstream 3181 true Chr5: 26084973-26088153 Arabidopsis thaliana
AT5G65280 1.0kb downstream 1.0kb downstream 1000 false Chr5: 26084973-26085972 Arabidopsis thaliana
AT5G65280 2.0kb upstream 2.0kb upstream 4181 true Chr5: 26085973-26090153 Arabidopsis thaliana
AT5G65280 2.0kb upstream 2.0kb upstream 2000 false Chr5: 26088154-26090153 Arabidopsis thaliana
AT5G65280 2.0kb downstream 2.0kb downstream 4181 true Chr5: 26083973-26088153 Arabidopsis thaliana
AT5G65280 2.0kb downstream 2.0kb downstream 2000 false Chr5: 26083973-26085972 Arabidopsis thaliana
AT5G65280 5.0kb upstream 5.0kb upstream 7181 true Chr5: 26085973-26093153 Arabidopsis thaliana
AT5G65280 5.0kb upstream 5.0kb upstream 5000 false Chr5: 26088154-26093153 Arabidopsis thaliana
AT5G65280 5.0kb downstream 5.0kb downstream 7181 true Chr5: 26080973-26088153 Arabidopsis thaliana
AT5G65280 5.0kb downstream 5.0kb downstream 5000 false Chr5: 26080973-26085972 Arabidopsis thaliana
AT5G65280 10.0kb upstream 10.0kb upstream 12181 true Chr5: 26085973-26098153 Arabidopsis thaliana
AT5G65280 10.0kb upstream 10.0kb upstream 10000 false Chr5: 26088154-26098153 Arabidopsis thaliana
AT5G65280 10.0kb downstream 10.0kb downstream 12181 true Chr5: 26075973-26088153 Arabidopsis thaliana
AT5G65280 10.0kb downstream 10.0kb downstream 10000 false Chr5: 26075973-26085972 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121779196 5273 Angiosperm View MSA
122372312 5261 Brassicaceae View MSA
123829720 5264 Brassicales-Malvales View MSA
124342407 5266 SBM View MSA
124242933 5268 Malvidae View MSA
124064681 5270 Rosid View MSA
123736678 5271 Pentapetalae View MSA
122769873 5272 Eudicot View MSA
121348546 5274 Embryophyte View MSA
123425935 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.045       Low
cufflinks 60.942     High  
cufflinks 2.456        
cufflinks 61.732     High  
cufflinks 2.83        
cufflinks 53.246     High  

0 Strain