Gene : AT5G65140 A. thaliana TAIR10
Defline:  (1 of 3) PTHR10788//PTHR10788:SF19 - TREHALOSE-6-PHOSPHATE SYNTHASE // TREHALOSE-PHOSPHATE PHOSPHATASE E-RELATED Genomic Order:  6042
Name:  ? AT5G65140 Secondary Identifier:  ? PAC:19668255
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G65140 0.5kb upstream 0.5kb upstream 3135 true Chr5: 26019588-26022722 Arabidopsis thaliana
AT5G65140 0.5kb upstream 0.5kb upstream 500 false Chr5: 26022223-26022722 Arabidopsis thaliana
AT5G65140 0.5kb downstream 0.5kb downstream 3135 true Chr5: 26019088-26022222 Arabidopsis thaliana
AT5G65140 0.5kb downstream 0.5kb downstream 500 false Chr5: 26019088-26019587 Arabidopsis thaliana
AT5G65140 1.0kb upstream 1.0kb upstream 3635 true Chr5: 26019588-26023222 Arabidopsis thaliana
AT5G65140 1.0kb upstream 1.0kb upstream 1000 false Chr5: 26022223-26023222 Arabidopsis thaliana
AT5G65140 1.0kb downstream 1.0kb downstream 3635 true Chr5: 26018588-26022222 Arabidopsis thaliana
AT5G65140 1.0kb downstream 1.0kb downstream 1000 false Chr5: 26018588-26019587 Arabidopsis thaliana
AT5G65140 2.0kb upstream 2.0kb upstream 4635 true Chr5: 26019588-26024222 Arabidopsis thaliana
AT5G65140 2.0kb upstream 2.0kb upstream 2000 false Chr5: 26022223-26024222 Arabidopsis thaliana
AT5G65140 2.0kb downstream 2.0kb downstream 4635 true Chr5: 26017588-26022222 Arabidopsis thaliana
AT5G65140 2.0kb downstream 2.0kb downstream 2000 false Chr5: 26017588-26019587 Arabidopsis thaliana
AT5G65140 5.0kb upstream 5.0kb upstream 7635 true Chr5: 26019588-26027222 Arabidopsis thaliana
AT5G65140 5.0kb upstream 5.0kb upstream 5000 false Chr5: 26022223-26027222 Arabidopsis thaliana
AT5G65140 5.0kb downstream 5.0kb downstream 7635 true Chr5: 26014588-26022222 Arabidopsis thaliana
AT5G65140 5.0kb downstream 5.0kb downstream 5000 false Chr5: 26014588-26019587 Arabidopsis thaliana
AT5G65140 10.0kb upstream 10.0kb upstream 12635 true Chr5: 26019588-26032222 Arabidopsis thaliana
AT5G65140 10.0kb upstream 10.0kb upstream 10000 false Chr5: 26022223-26032222 Arabidopsis thaliana
AT5G65140 10.0kb downstream 10.0kb downstream 12635 true Chr5: 26009588-26022222 Arabidopsis thaliana
AT5G65140 10.0kb downstream 10.0kb downstream 10000 false Chr5: 26009588-26019587 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376737 5261 Brassicaceae View MSA
123838730 5264 Brassicales-Malvales View MSA
124345863 5266 SBM View MSA
124249781 5268 Malvidae View MSA
124069564 5270 Rosid View MSA
123746966 5271 Pentapetalae View MSA
122786046 5272 Eudicot View MSA
122042129 5273 Angiosperm View MSA
121351669 5274 Embryophyte View MSA
123427869 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.079        
cufflinks 8.77       High
cufflinks 1.868        
cufflinks 7.34       High
cufflinks 2.024        
cufflinks 3.639        

0 Strain