Gene : CMPG2 A. thaliana TAIR10
Primary Identifier:  ? AT5G64660 Defline:  (1 of 3) PTHR22849//PTHR22849:SF20 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED
Genomic Order:  5989 Name:  ? AT5G64660
Secondary Identifier:  ? PAC:19667194
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-7511 Arabidopsis thaliana pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G64660 0.5kb upstream 0.5kb upstream 2040 true Chr5: 25841913-25843952 Arabidopsis thaliana
AT5G64660 0.5kb upstream 0.5kb upstream 500 false Chr5: 25843453-25843952 Arabidopsis thaliana
AT5G64660 0.5kb downstream 0.5kb downstream 2040 true Chr5: 25841413-25843452 Arabidopsis thaliana
AT5G64660 0.5kb downstream 0.5kb downstream 500 false Chr5: 25841413-25841912 Arabidopsis thaliana
AT5G64660 1.0kb upstream 1.0kb upstream 2540 true Chr5: 25841913-25844452 Arabidopsis thaliana
AT5G64660 1.0kb upstream 1.0kb upstream 1000 false Chr5: 25843453-25844452 Arabidopsis thaliana
AT5G64660 1.0kb downstream 1.0kb downstream 2540 true Chr5: 25840913-25843452 Arabidopsis thaliana
AT5G64660 1.0kb downstream 1.0kb downstream 1000 false Chr5: 25840913-25841912 Arabidopsis thaliana
AT5G64660 2.0kb upstream 2.0kb upstream 3540 true Chr5: 25841913-25845452 Arabidopsis thaliana
AT5G64660 2.0kb upstream 2.0kb upstream 2000 false Chr5: 25843453-25845452 Arabidopsis thaliana
AT5G64660 2.0kb downstream 2.0kb downstream 3540 true Chr5: 25839913-25843452 Arabidopsis thaliana
AT5G64660 2.0kb downstream 2.0kb downstream 2000 false Chr5: 25839913-25841912 Arabidopsis thaliana
AT5G64660 5.0kb upstream 5.0kb upstream 6540 true Chr5: 25841913-25848452 Arabidopsis thaliana
AT5G64660 5.0kb upstream 5.0kb upstream 5000 false Chr5: 25843453-25848452 Arabidopsis thaliana
AT5G64660 5.0kb downstream 5.0kb downstream 6540 true Chr5: 25836913-25843452 Arabidopsis thaliana
AT5G64660 5.0kb downstream 5.0kb downstream 5000 false Chr5: 25836913-25841912 Arabidopsis thaliana
AT5G64660 10.0kb upstream 10.0kb upstream 11540 true Chr5: 25841913-25853452 Arabidopsis thaliana
AT5G64660 10.0kb upstream 10.0kb upstream 10000 false Chr5: 25843453-25853452 Arabidopsis thaliana
AT5G64660 10.0kb downstream 10.0kb downstream 11540 true Chr5: 25831913-25843452 Arabidopsis thaliana
AT5G64660 10.0kb downstream 10.0kb downstream 10000 false Chr5: 25831913-25841912 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381582 5261 Brassicaceae View MSA
123833487 5264 Brassicales-Malvales View MSA
124351138 5266 SBM View MSA
124239746 5268 Malvidae View MSA
124071729 5270 Rosid View MSA
123744205 5271 Pentapetalae View MSA
122785881 5272 Eudicot View MSA
122041845 5273 Angiosperm View MSA
121351063 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.311        
cufflinks 36.457     High  
cufflinks 10.979        
cufflinks 39.686     High  
cufflinks 4.833       Low
cufflinks 38.049     High  

0 Strain