Gene : ATCG00670 A. thaliana TAIR10
Defline:  (1 of 1) PTHR10381:SF19 - ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 1 Genomic Order:  46
Name:  ? ATCG00670 Secondary Identifier:  ? PAC:19637984
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
ATCG00670 0.5kb upstream 0.5kb upstream 2473 true ChrC: 69910-72382 Arabidopsis thaliana
ATCG00670 0.5kb upstream 0.5kb upstream 500 false ChrC: 71883-72382 Arabidopsis thaliana
ATCG00670 0.5kb downstream 0.5kb downstream 2473 true ChrC: 69410-71882 Arabidopsis thaliana
ATCG00670 0.5kb downstream 0.5kb downstream 500 false ChrC: 69410-69909 Arabidopsis thaliana
ATCG00670 1.0kb upstream 1.0kb upstream 2973 true ChrC: 69910-72882 Arabidopsis thaliana
ATCG00670 1.0kb upstream 1.0kb upstream 1000 false ChrC: 71883-72882 Arabidopsis thaliana
ATCG00670 1.0kb downstream 1.0kb downstream 2973 true ChrC: 68910-71882 Arabidopsis thaliana
ATCG00670 1.0kb downstream 1.0kb downstream 1000 false ChrC: 68910-69909 Arabidopsis thaliana
ATCG00670 2.0kb upstream 2.0kb upstream 3973 true ChrC: 69910-73882 Arabidopsis thaliana
ATCG00670 2.0kb upstream 2.0kb upstream 2000 false ChrC: 71883-73882 Arabidopsis thaliana
ATCG00670 2.0kb downstream 2.0kb downstream 3973 true ChrC: 67910-71882 Arabidopsis thaliana
ATCG00670 2.0kb downstream 2.0kb downstream 2000 false ChrC: 67910-69909 Arabidopsis thaliana
ATCG00670 5.0kb upstream 5.0kb upstream 6973 true ChrC: 69910-76882 Arabidopsis thaliana
ATCG00670 5.0kb upstream 5.0kb upstream 5000 false ChrC: 71883-76882 Arabidopsis thaliana
ATCG00670 5.0kb downstream 5.0kb downstream 6973 true ChrC: 64910-71882 Arabidopsis thaliana
ATCG00670 5.0kb downstream 5.0kb downstream 5000 false ChrC: 64910-69909 Arabidopsis thaliana
ATCG00670 10.0kb upstream 10.0kb upstream 11973 true ChrC: 69910-81882 Arabidopsis thaliana
ATCG00670 10.0kb upstream 10.0kb upstream 10000 false ChrC: 71883-81882 Arabidopsis thaliana
ATCG00670 10.0kb downstream 10.0kb downstream 11973 true ChrC: 59910-71882 Arabidopsis thaliana
ATCG00670 10.0kb downstream 10.0kb downstream 10000 false ChrC: 59910-69909 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122331710 5261 Brassicaceae View MSA
123828731 5264 Brassicales-Malvales View MSA
124321553 5266 SBM View MSA
124245285 5268 Malvidae View MSA
124072014 5270 Rosid View MSA
123752039 5271 Pentapetalae View MSA
122797965 5272 Eudicot View MSA
122050965 5273 Angiosperm View MSA
121350380 5274 Embryophyte View MSA
123426609 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.285        
cufflinks 1.326       Low
cufflinks 6.546       High
cufflinks 1.181       Low
cufflinks 2.724        
cufflinks 2.797        

0 Strain