Gene : ATCG00160 A. thaliana TAIR10
Defline:  (1 of 2) K02967 - small subunit ribosomal protein S2 (RP-S2, MRPS2, rpsB) Genomic Order:  10
Name:  ? ATCG00160 Secondary Identifier:  ? PAC:19637981
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
ATCG00160 0.5kb upstream 0.5kb upstream 1211 true ChrC: 15013-16223 Arabidopsis thaliana
ATCG00160 0.5kb upstream 0.5kb upstream 500 false ChrC: 15724-16223 Arabidopsis thaliana
ATCG00160 0.5kb downstream 0.5kb downstream 1211 true ChrC: 14513-15723 Arabidopsis thaliana
ATCG00160 0.5kb downstream 0.5kb downstream 500 false ChrC: 14513-15012 Arabidopsis thaliana
ATCG00160 1.0kb upstream 1.0kb upstream 1711 true ChrC: 15013-16723 Arabidopsis thaliana
ATCG00160 1.0kb upstream 1.0kb upstream 1000 false ChrC: 15724-16723 Arabidopsis thaliana
ATCG00160 1.0kb downstream 1.0kb downstream 1711 true ChrC: 14013-15723 Arabidopsis thaliana
ATCG00160 1.0kb downstream 1.0kb downstream 1000 false ChrC: 14013-15012 Arabidopsis thaliana
ATCG00160 2.0kb upstream 2.0kb upstream 2711 true ChrC: 15013-17723 Arabidopsis thaliana
ATCG00160 2.0kb upstream 2.0kb upstream 2000 false ChrC: 15724-17723 Arabidopsis thaliana
ATCG00160 2.0kb downstream 2.0kb downstream 2711 true ChrC: 13013-15723 Arabidopsis thaliana
ATCG00160 2.0kb downstream 2.0kb downstream 2000 false ChrC: 13013-15012 Arabidopsis thaliana
ATCG00160 5.0kb upstream 5.0kb upstream 5711 true ChrC: 15013-20723 Arabidopsis thaliana
ATCG00160 5.0kb upstream 5.0kb upstream 5000 false ChrC: 15724-20723 Arabidopsis thaliana
ATCG00160 5.0kb downstream 5.0kb downstream 5711 true ChrC: 10013-15723 Arabidopsis thaliana
ATCG00160 5.0kb downstream 5.0kb downstream 5000 false ChrC: 10013-15012 Arabidopsis thaliana
ATCG00160 10.0kb upstream 10.0kb upstream 10711 true ChrC: 15013-25723 Arabidopsis thaliana
ATCG00160 10.0kb upstream 10.0kb upstream 10000 false ChrC: 15724-25723 Arabidopsis thaliana
ATCG00160 10.0kb downstream 10.0kb downstream 10711 true ChrC: 5013-15723 Arabidopsis thaliana
ATCG00160 10.0kb downstream 10.0kb downstream 10000 false ChrC: 5013-15012 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122331709 5261 Brassicaceae View MSA
123829256 5264 Brassicales-Malvales View MSA
124321587 5266 SBM View MSA
124250194 5268 Malvidae View MSA
124050946 5270 Rosid View MSA
123753545 5271 Pentapetalae View MSA
122797827 5272 Eudicot View MSA
122050260 5273 Angiosperm View MSA
121348361 5274 Embryophyte View MSA
123428637 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.461        
cufflinks 1.262       Low
cufflinks 8.45       High
cufflinks 1.17       Low
cufflinks 2.142        
cufflinks 4.605        

0 Strain