Gene : ATCG00120 A. thaliana TAIR10
Defline:  (1 of 1) K02111 - F-type H+-transporting ATPase subunit alpha (ATPF1A, atpA) Genomic Order:  6
Name:  ? ATCG00120 Secondary Identifier:  ? PAC:19637997
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4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-6126 Arabidopsis thaliana pathologic  
Athaliana PWY-7219 Arabidopsis thaliana pathologic  
Athaliana PWY-7229 Arabidopsis thaliana pathologic  
Athaliana PWY-841 Arabidopsis thaliana pathologic  

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
ATCG00120 0.5kb upstream 0.5kb upstream 2024 true ChrC: 9938-11961 Arabidopsis thaliana
ATCG00120 0.5kb upstream 0.5kb upstream 500 false ChrC: 11462-11961 Arabidopsis thaliana
ATCG00120 0.5kb downstream 0.5kb downstream 2024 true ChrC: 9438-11461 Arabidopsis thaliana
ATCG00120 0.5kb downstream 0.5kb downstream 500 false ChrC: 9438-9937 Arabidopsis thaliana
ATCG00120 1.0kb upstream 1.0kb upstream 2524 true ChrC: 9938-12461 Arabidopsis thaliana
ATCG00120 1.0kb upstream 1.0kb upstream 1000 false ChrC: 11462-12461 Arabidopsis thaliana
ATCG00120 1.0kb downstream 1.0kb downstream 2524 true ChrC: 8938-11461 Arabidopsis thaliana
ATCG00120 1.0kb downstream 1.0kb downstream 1000 false ChrC: 8938-9937 Arabidopsis thaliana
ATCG00120 2.0kb upstream 2.0kb upstream 3524 true ChrC: 9938-13461 Arabidopsis thaliana
ATCG00120 2.0kb upstream 2.0kb upstream 2000 false ChrC: 11462-13461 Arabidopsis thaliana
ATCG00120 2.0kb downstream 2.0kb downstream 3524 true ChrC: 7938-11461 Arabidopsis thaliana
ATCG00120 2.0kb downstream 2.0kb downstream 2000 false ChrC: 7938-9937 Arabidopsis thaliana
ATCG00120 5.0kb upstream 5.0kb upstream 6524 true ChrC: 9938-16461 Arabidopsis thaliana
ATCG00120 5.0kb upstream 5.0kb upstream 5000 false ChrC: 11462-16461 Arabidopsis thaliana
ATCG00120 5.0kb downstream 5.0kb downstream 6524 true ChrC: 4938-11461 Arabidopsis thaliana
ATCG00120 5.0kb downstream 5.0kb downstream 5000 false ChrC: 4938-9937 Arabidopsis thaliana
ATCG00120 10.0kb upstream 10.0kb upstream 11524 true ChrC: 9938-21461 Arabidopsis thaliana
ATCG00120 10.0kb upstream 10.0kb upstream 10000 false ChrC: 11462-21461 Arabidopsis thaliana
ATCG00120 10.0kb downstream 10.0kb downstream 11461 true ChrC: 1-11461 Arabidopsis thaliana
ATCG00120 10.0kb downstream 10.0kb downstream 9937 false ChrC: 1-9937 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122344127 5261 Brassicaceae View MSA
123837231 5264 Brassicales-Malvales View MSA
124322265 5266 SBM View MSA
124253426 5268 Malvidae View MSA
124064158 5270 Rosid View MSA
123753752 5271 Pentapetalae View MSA
122797462 5272 Eudicot View MSA
122051574 5273 Angiosperm View MSA
123429126 5275 Viridiplantae View MSA
121351571 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.24        
cufflinks 1.356       Low
cufflinks 51.727     High High
cufflinks 1.276       Low
cufflinks 14.678        
cufflinks 3.629        

0 Strain