Gene : ATCG00470 A. thaliana TAIR10
Defline:  (1 of 1) K02114 - F-type H+-transporting ATPase subunit epsilon (ATPF1E, atpC) Genomic Order:  27
Name:  ? ATCG00470 Secondary Identifier:  ? PAC:19637994
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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
ATCG00470 0.5kb upstream 0.5kb upstream 899 true ChrC: 52265-53163 Arabidopsis thaliana
ATCG00470 0.5kb upstream 0.5kb upstream 500 false ChrC: 52664-53163 Arabidopsis thaliana
ATCG00470 0.5kb downstream 0.5kb downstream 899 true ChrC: 51765-52663 Arabidopsis thaliana
ATCG00470 0.5kb downstream 0.5kb downstream 500 false ChrC: 51765-52264 Arabidopsis thaliana
ATCG00470 1.0kb upstream 1.0kb upstream 1399 true ChrC: 52265-53663 Arabidopsis thaliana
ATCG00470 1.0kb upstream 1.0kb upstream 1000 false ChrC: 52664-53663 Arabidopsis thaliana
ATCG00470 1.0kb downstream 1.0kb downstream 1399 true ChrC: 51265-52663 Arabidopsis thaliana
ATCG00470 1.0kb downstream 1.0kb downstream 1000 false ChrC: 51265-52264 Arabidopsis thaliana
ATCG00470 2.0kb upstream 2.0kb upstream 2399 true ChrC: 52265-54663 Arabidopsis thaliana
ATCG00470 2.0kb upstream 2.0kb upstream 2000 false ChrC: 52664-54663 Arabidopsis thaliana
ATCG00470 2.0kb downstream 2.0kb downstream 2399 true ChrC: 50265-52663 Arabidopsis thaliana
ATCG00470 2.0kb downstream 2.0kb downstream 2000 false ChrC: 50265-52264 Arabidopsis thaliana
ATCG00470 5.0kb upstream 5.0kb upstream 5399 true ChrC: 52265-57663 Arabidopsis thaliana
ATCG00470 5.0kb upstream 5.0kb upstream 5000 false ChrC: 52664-57663 Arabidopsis thaliana
ATCG00470 5.0kb downstream 5.0kb downstream 5399 true ChrC: 47265-52663 Arabidopsis thaliana
ATCG00470 5.0kb downstream 5.0kb downstream 5000 false ChrC: 47265-52264 Arabidopsis thaliana
ATCG00470 10.0kb upstream 10.0kb upstream 10399 true ChrC: 52265-62663 Arabidopsis thaliana
ATCG00470 10.0kb upstream 10.0kb upstream 10000 false ChrC: 52664-62663 Arabidopsis thaliana
ATCG00470 10.0kb downstream 10.0kb downstream 10399 true ChrC: 42265-52663 Arabidopsis thaliana
ATCG00470 10.0kb downstream 10.0kb downstream 10000 false ChrC: 42265-52264 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122331533 5261 Brassicaceae Singleton cluster - no MSA
123837326 5264 Brassicales-Malvales View MSA
124322287 5266 SBM View MSA
124248134 5268 Malvidae View MSA
124037985 5270 Rosid View MSA
123747220 5271 Pentapetalae View MSA
122772124 5272 Eudicot View MSA
122043419 5273 Angiosperm View MSA
121310118 5274 Embryophyte View MSA
123347694 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.566        
cufflinks 0.604       Low
cufflinks 32.923     High High
cufflinks 0.629       Low
cufflinks 11.911        
cufflinks 1.701        

0 Strain