Gene : AT5G66675 A. thaliana TAIR10
Defline:  (1 of 16) PF05055 - Protein of unknown function (DUF677) (DUF677) Genomic Order:  6214
Name:  ? AT5G66675 Secondary Identifier:  ? PAC:19669174
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G66675 0.5kb upstream 0.5kb upstream 2408 true Chr5: 26615083-26617490 Arabidopsis thaliana
AT5G66675 0.5kb upstream 0.5kb upstream 500 false Chr5: 26616991-26617490 Arabidopsis thaliana
AT5G66675 0.5kb downstream 0.5kb downstream 2408 true Chr5: 26614583-26616990 Arabidopsis thaliana
AT5G66675 0.5kb downstream 0.5kb downstream 500 false Chr5: 26614583-26615082 Arabidopsis thaliana
AT5G66675 1.0kb upstream 1.0kb upstream 2908 true Chr5: 26615083-26617990 Arabidopsis thaliana
AT5G66675 1.0kb upstream 1.0kb upstream 1000 false Chr5: 26616991-26617990 Arabidopsis thaliana
AT5G66675 1.0kb downstream 1.0kb downstream 2908 true Chr5: 26614083-26616990 Arabidopsis thaliana
AT5G66675 1.0kb downstream 1.0kb downstream 1000 false Chr5: 26614083-26615082 Arabidopsis thaliana
AT5G66675 2.0kb upstream 2.0kb upstream 3908 true Chr5: 26615083-26618990 Arabidopsis thaliana
AT5G66675 2.0kb upstream 2.0kb upstream 2000 false Chr5: 26616991-26618990 Arabidopsis thaliana
AT5G66675 2.0kb downstream 2.0kb downstream 3908 true Chr5: 26613083-26616990 Arabidopsis thaliana
AT5G66675 2.0kb downstream 2.0kb downstream 2000 false Chr5: 26613083-26615082 Arabidopsis thaliana
AT5G66675 5.0kb upstream 5.0kb upstream 6908 true Chr5: 26615083-26621990 Arabidopsis thaliana
AT5G66675 5.0kb upstream 5.0kb upstream 5000 false Chr5: 26616991-26621990 Arabidopsis thaliana
AT5G66675 5.0kb downstream 5.0kb downstream 6908 true Chr5: 26610083-26616990 Arabidopsis thaliana
AT5G66675 5.0kb downstream 5.0kb downstream 5000 false Chr5: 26610083-26615082 Arabidopsis thaliana
AT5G66675 10.0kb upstream 10.0kb upstream 11908 true Chr5: 26615083-26626990 Arabidopsis thaliana
AT5G66675 10.0kb upstream 10.0kb upstream 10000 false Chr5: 26616991-26626990 Arabidopsis thaliana
AT5G66675 10.0kb downstream 10.0kb downstream 11908 true Chr5: 26605083-26616990 Arabidopsis thaliana
AT5G66675 10.0kb downstream 10.0kb downstream 10000 false Chr5: 26605083-26615082 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121510261 5273 Angiosperm View MSA
122361316 5261 Brassicaceae View MSA
123798138 5264 Brassicales-Malvales View MSA
124295813 5266 SBM View MSA
124148146 5268 Malvidae View MSA
123874202 5270 Rosid View MSA
123458210 5271 Pentapetalae View MSA
122493619 5272 Eudicot View MSA
121349929 5274 Embryophyte View MSA
123381506 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 29.088     High  
cufflinks 44.297     High High
cufflinks 27.437     High  
cufflinks 37.167     High  
cufflinks 23.238       Low
cufflinks 35.426     High  

0 Strain