Gene : ATMG00280 A. thaliana TAIR10
Defline:  (1 of 7) 4.1.1.39 - Ribulose-bisphosphate carboxylase / RuBP carboxylase Genomic Order:  23
Name:  ? ATMG00280 Secondary Identifier:  ? PAC:19643636
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Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana CALVIN-PWY Arabidopsis thaliana pathologic  
Athaliana PHOTOALL-PWY Arabidopsis thaliana pathologic  
Athaliana PWY-5723 Arabidopsis thaliana pathologic  

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
ATMG00280 0.5kb upstream 0.5kb upstream 833 true ChrM: 77819-78651 Arabidopsis thaliana
ATMG00280 0.5kb upstream 0.5kb upstream 500 false ChrM: 78152-78651 Arabidopsis thaliana
ATMG00280 0.5kb downstream 0.5kb downstream 833 true ChrM: 77319-78151 Arabidopsis thaliana
ATMG00280 0.5kb downstream 0.5kb downstream 500 false ChrM: 77319-77818 Arabidopsis thaliana
ATMG00280 1.0kb upstream 1.0kb upstream 1333 true ChrM: 77819-79151 Arabidopsis thaliana
ATMG00280 1.0kb upstream 1.0kb upstream 1000 false ChrM: 78152-79151 Arabidopsis thaliana
ATMG00280 1.0kb downstream 1.0kb downstream 1333 true ChrM: 76819-78151 Arabidopsis thaliana
ATMG00280 1.0kb downstream 1.0kb downstream 1000 false ChrM: 76819-77818 Arabidopsis thaliana
ATMG00280 2.0kb upstream 2.0kb upstream 2333 true ChrM: 77819-80151 Arabidopsis thaliana
ATMG00280 2.0kb upstream 2.0kb upstream 2000 false ChrM: 78152-80151 Arabidopsis thaliana
ATMG00280 2.0kb downstream 2.0kb downstream 2333 true ChrM: 75819-78151 Arabidopsis thaliana
ATMG00280 2.0kb downstream 2.0kb downstream 2000 false ChrM: 75819-77818 Arabidopsis thaliana
ATMG00280 5.0kb upstream 5.0kb upstream 5333 true ChrM: 77819-83151 Arabidopsis thaliana
ATMG00280 5.0kb upstream 5.0kb upstream 5000 false ChrM: 78152-83151 Arabidopsis thaliana
ATMG00280 5.0kb downstream 5.0kb downstream 5333 true ChrM: 72819-78151 Arabidopsis thaliana
ATMG00280 5.0kb downstream 5.0kb downstream 5000 false ChrM: 72819-77818 Arabidopsis thaliana
ATMG00280 10.0kb upstream 10.0kb upstream 10333 true ChrM: 77819-88151 Arabidopsis thaliana
ATMG00280 10.0kb upstream 10.0kb upstream 10000 false ChrM: 78152-88151 Arabidopsis thaliana
ATMG00280 10.0kb downstream 10.0kb downstream 10333 true ChrM: 67819-78151 Arabidopsis thaliana
ATMG00280 10.0kb downstream 10.0kb downstream 10000 false ChrM: 67819-77818 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121780125 5273 Angiosperm View MSA
122331657 5261 Brassicaceae View MSA
123772813 5264 Brassicales-Malvales View MSA
124271320 5266 SBM View MSA
124127317 5268 Malvidae View MSA
123856175 5270 Rosid View MSA
123745193 5271 Pentapetalae View MSA
122771401 5272 Eudicot View MSA
121051752 5274 Embryophyte View MSA
123091827 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.044     Low Low
cufflinks 0.092     Low  
cufflinks 0.307        
cufflinks 0.237     Low  
cufflinks 0.081     Low  
cufflinks 0.467       High

0 Strain