Gene : AT3G08800 A. thaliana TAIR10
Defline:  (1 of 1) K13141 - integrator complex subunit 4 (INTS4) Genomic Order:  830
Name:  ? AT3G08800 Secondary Identifier:  ? PAC:19663563
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G08800 0.5kb upstream 0.5kb upstream 4549 true Chr3: 2670648-2675196 Arabidopsis thaliana
AT3G08800 0.5kb upstream 0.5kb upstream 500 false Chr3: 2670648-2671147 Arabidopsis thaliana
AT3G08800 0.5kb downstream 0.5kb downstream 4549 true Chr3: 2671148-2675696 Arabidopsis thaliana
AT3G08800 0.5kb downstream 0.5kb downstream 500 false Chr3: 2675197-2675696 Arabidopsis thaliana
AT3G08800 1.0kb upstream 1.0kb upstream 5049 true Chr3: 2670148-2675196 Arabidopsis thaliana
AT3G08800 1.0kb upstream 1.0kb upstream 1000 false Chr3: 2670148-2671147 Arabidopsis thaliana
AT3G08800 1.0kb downstream 1.0kb downstream 5049 true Chr3: 2671148-2676196 Arabidopsis thaliana
AT3G08800 1.0kb downstream 1.0kb downstream 1000 false Chr3: 2675197-2676196 Arabidopsis thaliana
AT3G08800 2.0kb upstream 2.0kb upstream 6049 true Chr3: 2669148-2675196 Arabidopsis thaliana
AT3G08800 2.0kb upstream 2.0kb upstream 2000 false Chr3: 2669148-2671147 Arabidopsis thaliana
AT3G08800 2.0kb downstream 2.0kb downstream 6049 true Chr3: 2671148-2677196 Arabidopsis thaliana
AT3G08800 2.0kb downstream 2.0kb downstream 2000 false Chr3: 2675197-2677196 Arabidopsis thaliana
AT3G08800 5.0kb upstream 5.0kb upstream 9049 true Chr3: 2666148-2675196 Arabidopsis thaliana
AT3G08800 5.0kb upstream 5.0kb upstream 5000 false Chr3: 2666148-2671147 Arabidopsis thaliana
AT3G08800 5.0kb downstream 5.0kb downstream 9049 true Chr3: 2671148-2680196 Arabidopsis thaliana
AT3G08800 5.0kb downstream 5.0kb downstream 5000 false Chr3: 2675197-2680196 Arabidopsis thaliana
AT3G08800 10.0kb upstream 10.0kb upstream 14049 true Chr3: 2661148-2675196 Arabidopsis thaliana
AT3G08800 10.0kb upstream 10.0kb upstream 10000 false Chr3: 2661148-2671147 Arabidopsis thaliana
AT3G08800 10.0kb downstream 10.0kb downstream 14049 true Chr3: 2671148-2685196 Arabidopsis thaliana
AT3G08800 10.0kb downstream 10.0kb downstream 10000 false Chr3: 2675197-2685196 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361182 5261 Brassicaceae View MSA
123834609 5264 Brassicales-Malvales View MSA
124339221 5266 SBM View MSA
124238026 5268 Malvidae View MSA
124063387 5270 Rosid View MSA
123745371 5271 Pentapetalae View MSA
122790922 5272 Eudicot View MSA
122048339 5273 Angiosperm View MSA
121350116 5274 Embryophyte View MSA
123381584 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.447        
cufflinks 3.337        
cufflinks 1.04       Low
cufflinks 3.05        
cufflinks 1.131        
cufflinks 3.085        

0 Strain