Gene : AT3G07810 A. thaliana TAIR10
Defline:  (1 of 3) PTHR24012:SF433 - RNA RECOGNITION MOTIF-CONTAINING PROTEIN Genomic Order:  773
Name:  ? AT3G07810 Secondary Identifier:  ? PAC:19660828
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G07810 0.5kb upstream 0.5kb upstream 3978 true Chr3: 2491773-2495750 Arabidopsis thaliana
AT3G07810 0.5kb upstream 0.5kb upstream 500 false Chr3: 2491773-2492272 Arabidopsis thaliana
AT3G07810 0.5kb downstream 0.5kb downstream 3978 true Chr3: 2492273-2496250 Arabidopsis thaliana
AT3G07810 0.5kb downstream 0.5kb downstream 500 false Chr3: 2495751-2496250 Arabidopsis thaliana
AT3G07810 1.0kb upstream 1.0kb upstream 4478 true Chr3: 2491273-2495750 Arabidopsis thaliana
AT3G07810 1.0kb upstream 1.0kb upstream 1000 false Chr3: 2491273-2492272 Arabidopsis thaliana
AT3G07810 1.0kb downstream 1.0kb downstream 4478 true Chr3: 2492273-2496750 Arabidopsis thaliana
AT3G07810 1.0kb downstream 1.0kb downstream 1000 false Chr3: 2495751-2496750 Arabidopsis thaliana
AT3G07810 2.0kb upstream 2.0kb upstream 5478 true Chr3: 2490273-2495750 Arabidopsis thaliana
AT3G07810 2.0kb upstream 2.0kb upstream 2000 false Chr3: 2490273-2492272 Arabidopsis thaliana
AT3G07810 2.0kb downstream 2.0kb downstream 5478 true Chr3: 2492273-2497750 Arabidopsis thaliana
AT3G07810 2.0kb downstream 2.0kb downstream 2000 false Chr3: 2495751-2497750 Arabidopsis thaliana
AT3G07810 5.0kb upstream 5.0kb upstream 8478 true Chr3: 2487273-2495750 Arabidopsis thaliana
AT3G07810 5.0kb upstream 5.0kb upstream 5000 false Chr3: 2487273-2492272 Arabidopsis thaliana
AT3G07810 5.0kb downstream 5.0kb downstream 8478 true Chr3: 2492273-2500750 Arabidopsis thaliana
AT3G07810 5.0kb downstream 5.0kb downstream 5000 false Chr3: 2495751-2500750 Arabidopsis thaliana
AT3G07810 10.0kb upstream 10.0kb upstream 13478 true Chr3: 2482273-2495750 Arabidopsis thaliana
AT3G07810 10.0kb upstream 10.0kb upstream 10000 false Chr3: 2482273-2492272 Arabidopsis thaliana
AT3G07810 10.0kb downstream 10.0kb downstream 13478 true Chr3: 2492273-2505750 Arabidopsis thaliana
AT3G07810 10.0kb downstream 10.0kb downstream 10000 false Chr3: 2495751-2505750 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367165 5261 Brassicaceae View MSA
123835507 5264 Brassicales-Malvales View MSA
124345342 5266 SBM View MSA
124254452 5268 Malvidae View MSA
124070648 5270 Rosid View MSA
123749642 5271 Pentapetalae View MSA
122786461 5272 Eudicot View MSA
122044662 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121349165 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.167        
cufflinks 18.154       High
cufflinks 8.665        
cufflinks 14.826        
cufflinks 7.915       Low
cufflinks 17.622       High

0 Strain