Gene : AT3G07290 A. thaliana TAIR10
Defline:  (1 of 185) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  716
Name:  ? AT3G07290 Secondary Identifier:  ? PAC:19660533
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G07290 0.5kb upstream 0.5kb upstream 3143 true Chr3: 2321740-2324882 Arabidopsis thaliana
AT3G07290 0.5kb upstream 0.5kb upstream 500 false Chr3: 2324383-2324882 Arabidopsis thaliana
AT3G07290 0.5kb downstream 0.5kb downstream 3143 true Chr3: 2321240-2324382 Arabidopsis thaliana
AT3G07290 0.5kb downstream 0.5kb downstream 500 false Chr3: 2321240-2321739 Arabidopsis thaliana
AT3G07290 1.0kb upstream 1.0kb upstream 3643 true Chr3: 2321740-2325382 Arabidopsis thaliana
AT3G07290 1.0kb upstream 1.0kb upstream 1000 false Chr3: 2324383-2325382 Arabidopsis thaliana
AT3G07290 1.0kb downstream 1.0kb downstream 3643 true Chr3: 2320740-2324382 Arabidopsis thaliana
AT3G07290 1.0kb downstream 1.0kb downstream 1000 false Chr3: 2320740-2321739 Arabidopsis thaliana
AT3G07290 2.0kb upstream 2.0kb upstream 4643 true Chr3: 2321740-2326382 Arabidopsis thaliana
AT3G07290 2.0kb upstream 2.0kb upstream 2000 false Chr3: 2324383-2326382 Arabidopsis thaliana
AT3G07290 2.0kb downstream 2.0kb downstream 4643 true Chr3: 2319740-2324382 Arabidopsis thaliana
AT3G07290 2.0kb downstream 2.0kb downstream 2000 false Chr3: 2319740-2321739 Arabidopsis thaliana
AT3G07290 5.0kb upstream 5.0kb upstream 7643 true Chr3: 2321740-2329382 Arabidopsis thaliana
AT3G07290 5.0kb upstream 5.0kb upstream 5000 false Chr3: 2324383-2329382 Arabidopsis thaliana
AT3G07290 5.0kb downstream 5.0kb downstream 7643 true Chr3: 2316740-2324382 Arabidopsis thaliana
AT3G07290 5.0kb downstream 5.0kb downstream 5000 false Chr3: 2316740-2321739 Arabidopsis thaliana
AT3G07290 10.0kb upstream 10.0kb upstream 12643 true Chr3: 2321740-2334382 Arabidopsis thaliana
AT3G07290 10.0kb upstream 10.0kb upstream 10000 false Chr3: 2324383-2334382 Arabidopsis thaliana
AT3G07290 10.0kb downstream 10.0kb downstream 12643 true Chr3: 2311740-2324382 Arabidopsis thaliana
AT3G07290 10.0kb downstream 10.0kb downstream 10000 false Chr3: 2311740-2321739 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377715 5261 Brassicaceae View MSA
123834353 5264 Brassicales-Malvales View MSA
124339820 5266 SBM View MSA
124251579 5268 Malvidae View MSA
124072588 5270 Rosid View MSA
123753756 5271 Pentapetalae View MSA
122797794 5272 Eudicot View MSA
122051419 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.985        
cufflinks 1.758       High
cufflinks 0.81        
cufflinks 1.328        
cufflinks 0.702       Low
cufflinks 1.626        

0 Strain