Gene : MEE32 A. thaliana TAIR10
Primary Identifier:  ? AT3G06350 Defline:  (1 of 1) 1.1.1.25//4.2.1.10 - Shikimate dehydrogenase / Shikimate:NADP(+) oxidoreductase // 3-dehydroquinate dehydratase
Genomic Order:  611 Name:  ? AT3G06350
Secondary Identifier:  ? PAC:19664898
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana ARO-PWY Arabidopsis thaliana pathologic  
Athaliana PWY-6163 Arabidopsis thaliana pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G06350 0.5kb upstream 0.5kb upstream 3950 true Chr3: 1924310-1928259 Arabidopsis thaliana
AT3G06350 0.5kb upstream 0.5kb upstream 500 false Chr3: 1927760-1928259 Arabidopsis thaliana
AT3G06350 0.5kb downstream 0.5kb downstream 3950 true Chr3: 1923810-1927759 Arabidopsis thaliana
AT3G06350 0.5kb downstream 0.5kb downstream 500 false Chr3: 1923810-1924309 Arabidopsis thaliana
AT3G06350 1.0kb upstream 1.0kb upstream 4450 true Chr3: 1924310-1928759 Arabidopsis thaliana
AT3G06350 1.0kb upstream 1.0kb upstream 1000 false Chr3: 1927760-1928759 Arabidopsis thaliana
AT3G06350 1.0kb downstream 1.0kb downstream 4450 true Chr3: 1923310-1927759 Arabidopsis thaliana
AT3G06350 1.0kb downstream 1.0kb downstream 1000 false Chr3: 1923310-1924309 Arabidopsis thaliana
AT3G06350 2.0kb upstream 2.0kb upstream 5450 true Chr3: 1924310-1929759 Arabidopsis thaliana
AT3G06350 2.0kb upstream 2.0kb upstream 2000 false Chr3: 1927760-1929759 Arabidopsis thaliana
AT3G06350 2.0kb downstream 2.0kb downstream 5450 true Chr3: 1922310-1927759 Arabidopsis thaliana
AT3G06350 2.0kb downstream 2.0kb downstream 2000 false Chr3: 1922310-1924309 Arabidopsis thaliana
AT3G06350 5.0kb upstream 5.0kb upstream 8450 true Chr3: 1924310-1932759 Arabidopsis thaliana
AT3G06350 5.0kb upstream 5.0kb upstream 5000 false Chr3: 1927760-1932759 Arabidopsis thaliana
AT3G06350 5.0kb downstream 5.0kb downstream 8450 true Chr3: 1919310-1927759 Arabidopsis thaliana
AT3G06350 5.0kb downstream 5.0kb downstream 5000 false Chr3: 1919310-1924309 Arabidopsis thaliana
AT3G06350 10.0kb upstream 10.0kb upstream 13450 true Chr3: 1924310-1937759 Arabidopsis thaliana
AT3G06350 10.0kb upstream 10.0kb upstream 10000 false Chr3: 1927760-1937759 Arabidopsis thaliana
AT3G06350 10.0kb downstream 10.0kb downstream 13450 true Chr3: 1914310-1927759 Arabidopsis thaliana
AT3G06350 10.0kb downstream 10.0kb downstream 10000 false Chr3: 1914310-1924309 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372861 5261 Brassicaceae View MSA
123830471 5264 Brassicales-Malvales View MSA
124341830 5266 SBM View MSA
124242776 5268 Malvidae View MSA
124068153 5270 Rosid View MSA
123743031 5271 Pentapetalae View MSA
122788487 5272 Eudicot View MSA
122045026 5273 Angiosperm View MSA
121345779 5274 Embryophyte View MSA
123427556 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.939        
cufflinks 29.311     High  
cufflinks 18.908       Low
cufflinks 33.039     High  
cufflinks 20.134        
cufflinks 34.202     High High

0 Strain