Gene : BPM2 A. thaliana TAIR10
Primary Identifier:  ? AT3G06190 Defline:  (1 of 1) PTHR24411//PTHR24411:SF33//PTHR24411:SF35 - FAMILY NOT NAMED // SUBFAMILY NOT NAMED // BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1-RELATED
Genomic Order:  595 Name:  ? AT3G06190
Secondary Identifier:  ? PAC:19660999
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G06190 0.5kb upstream 0.5kb upstream 3123 true Chr3: 1874291-1877413 Arabidopsis thaliana
AT3G06190 0.5kb upstream 0.5kb upstream 500 false Chr3: 1876914-1877413 Arabidopsis thaliana
AT3G06190 0.5kb downstream 0.5kb downstream 3123 true Chr3: 1873791-1876913 Arabidopsis thaliana
AT3G06190 0.5kb downstream 0.5kb downstream 500 false Chr3: 1873791-1874290 Arabidopsis thaliana
AT3G06190 1.0kb upstream 1.0kb upstream 3623 true Chr3: 1874291-1877913 Arabidopsis thaliana
AT3G06190 1.0kb upstream 1.0kb upstream 1000 false Chr3: 1876914-1877913 Arabidopsis thaliana
AT3G06190 1.0kb downstream 1.0kb downstream 3623 true Chr3: 1873291-1876913 Arabidopsis thaliana
AT3G06190 1.0kb downstream 1.0kb downstream 1000 false Chr3: 1873291-1874290 Arabidopsis thaliana
AT3G06190 2.0kb upstream 2.0kb upstream 4623 true Chr3: 1874291-1878913 Arabidopsis thaliana
AT3G06190 2.0kb upstream 2.0kb upstream 2000 false Chr3: 1876914-1878913 Arabidopsis thaliana
AT3G06190 2.0kb downstream 2.0kb downstream 4623 true Chr3: 1872291-1876913 Arabidopsis thaliana
AT3G06190 2.0kb downstream 2.0kb downstream 2000 false Chr3: 1872291-1874290 Arabidopsis thaliana
AT3G06190 5.0kb upstream 5.0kb upstream 7623 true Chr3: 1874291-1881913 Arabidopsis thaliana
AT3G06190 5.0kb upstream 5.0kb upstream 5000 false Chr3: 1876914-1881913 Arabidopsis thaliana
AT3G06190 5.0kb downstream 5.0kb downstream 7623 true Chr3: 1869291-1876913 Arabidopsis thaliana
AT3G06190 5.0kb downstream 5.0kb downstream 5000 false Chr3: 1869291-1874290 Arabidopsis thaliana
AT3G06190 10.0kb upstream 10.0kb upstream 12623 true Chr3: 1874291-1886913 Arabidopsis thaliana
AT3G06190 10.0kb upstream 10.0kb upstream 10000 false Chr3: 1876914-1886913 Arabidopsis thaliana
AT3G06190 10.0kb downstream 10.0kb downstream 12623 true Chr3: 1864291-1876913 Arabidopsis thaliana
AT3G06190 10.0kb downstream 10.0kb downstream 10000 false Chr3: 1864291-1874290 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040960 5273 Angiosperm View MSA
122378828 5261 Brassicaceae View MSA
123839948 5264 Brassicales-Malvales View MSA
124347827 5266 SBM View MSA
124244421 5268 Malvidae View MSA
124064148 5270 Rosid View MSA
123743633 5271 Pentapetalae View MSA
122791318 5272 Eudicot View MSA
121348457 5274 Embryophyte View MSA
123428082 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.83        
cufflinks 9.205        
cufflinks 6.054       Low
cufflinks 10.265       High
cufflinks 6.686        
cufflinks 9.016        

0 Strain