Gene : AT3G05510 A. thaliana TAIR10
Defline:  (1 of 1) PTHR12497:SF0 - TAFAZZIN Genomic Order:  510
Name:  ? AT3G05510 Secondary Identifier:  ? PAC:19664169
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-5995 Arabidopsis thaliana pathologic  
Athaliana PWY-6433 Arabidopsis thaliana pathologic  
Athaliana PWY-6803 Arabidopsis thaliana pathologic  
Athaliana PWY-7409 Arabidopsis thaliana pathologic  
Athaliana PWY-7416 Arabidopsis thaliana pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G05510 0.5kb upstream 0.5kb upstream 3403 true Chr3: 1594869-1598271 Arabidopsis thaliana
AT3G05510 0.5kb upstream 0.5kb upstream 500 false Chr3: 1594869-1595368 Arabidopsis thaliana
AT3G05510 0.5kb downstream 0.5kb downstream 3403 true Chr3: 1595369-1598771 Arabidopsis thaliana
AT3G05510 0.5kb downstream 0.5kb downstream 500 false Chr3: 1598272-1598771 Arabidopsis thaliana
AT3G05510 1.0kb upstream 1.0kb upstream 3903 true Chr3: 1594369-1598271 Arabidopsis thaliana
AT3G05510 1.0kb upstream 1.0kb upstream 1000 false Chr3: 1594369-1595368 Arabidopsis thaliana
AT3G05510 1.0kb downstream 1.0kb downstream 3903 true Chr3: 1595369-1599271 Arabidopsis thaliana
AT3G05510 1.0kb downstream 1.0kb downstream 1000 false Chr3: 1598272-1599271 Arabidopsis thaliana
AT3G05510 2.0kb upstream 2.0kb upstream 4903 true Chr3: 1593369-1598271 Arabidopsis thaliana
AT3G05510 2.0kb upstream 2.0kb upstream 2000 false Chr3: 1593369-1595368 Arabidopsis thaliana
AT3G05510 2.0kb downstream 2.0kb downstream 4903 true Chr3: 1595369-1600271 Arabidopsis thaliana
AT3G05510 2.0kb downstream 2.0kb downstream 2000 false Chr3: 1598272-1600271 Arabidopsis thaliana
AT3G05510 5.0kb upstream 5.0kb upstream 7903 true Chr3: 1590369-1598271 Arabidopsis thaliana
AT3G05510 5.0kb upstream 5.0kb upstream 5000 false Chr3: 1590369-1595368 Arabidopsis thaliana
AT3G05510 5.0kb downstream 5.0kb downstream 7903 true Chr3: 1595369-1603271 Arabidopsis thaliana
AT3G05510 5.0kb downstream 5.0kb downstream 5000 false Chr3: 1598272-1603271 Arabidopsis thaliana
AT3G05510 10.0kb upstream 10.0kb upstream 12903 true Chr3: 1585369-1598271 Arabidopsis thaliana
AT3G05510 10.0kb upstream 10.0kb upstream 10000 false Chr3: 1585369-1595368 Arabidopsis thaliana
AT3G05510 10.0kb downstream 10.0kb downstream 12903 true Chr3: 1595369-1608271 Arabidopsis thaliana
AT3G05510 10.0kb downstream 10.0kb downstream 10000 false Chr3: 1598272-1608271 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367574 5261 Brassicaceae View MSA
123833561 5264 Brassicales-Malvales View MSA
124344155 5266 SBM View MSA
124239432 5268 Malvidae View MSA
124061171 5270 Rosid View MSA
123739404 5271 Pentapetalae View MSA
122785727 5272 Eudicot View MSA
122044653 5273 Angiosperm View MSA
121345325 5274 Embryophyte View MSA
123425541 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.846       Low
cufflinks 2.849        
cufflinks 1.805       Low
cufflinks 3.148       High
cufflinks 2.264        
cufflinks 2.635        

0 Strain