Gene : AT3G05570 A. thaliana TAIR10
Genomic Order:  517 Name:  ? AT3G05570
Secondary Identifier:  ? PAC:19663475
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G05570 0.5kb upstream 0.5kb upstream 1738 true Chr3: 1616102-1617839 Arabidopsis thaliana
AT3G05570 0.5kb upstream 0.5kb upstream 500 false Chr3: 1617340-1617839 Arabidopsis thaliana
AT3G05570 0.5kb downstream 0.5kb downstream 1738 true Chr3: 1615602-1617339 Arabidopsis thaliana
AT3G05570 0.5kb downstream 0.5kb downstream 500 false Chr3: 1615602-1616101 Arabidopsis thaliana
AT3G05570 1.0kb upstream 1.0kb upstream 2238 true Chr3: 1616102-1618339 Arabidopsis thaliana
AT3G05570 1.0kb upstream 1.0kb upstream 1000 false Chr3: 1617340-1618339 Arabidopsis thaliana
AT3G05570 1.0kb downstream 1.0kb downstream 2238 true Chr3: 1615102-1617339 Arabidopsis thaliana
AT3G05570 1.0kb downstream 1.0kb downstream 1000 false Chr3: 1615102-1616101 Arabidopsis thaliana
AT3G05570 2.0kb upstream 2.0kb upstream 3238 true Chr3: 1616102-1619339 Arabidopsis thaliana
AT3G05570 2.0kb upstream 2.0kb upstream 2000 false Chr3: 1617340-1619339 Arabidopsis thaliana
AT3G05570 2.0kb downstream 2.0kb downstream 3238 true Chr3: 1614102-1617339 Arabidopsis thaliana
AT3G05570 2.0kb downstream 2.0kb downstream 2000 false Chr3: 1614102-1616101 Arabidopsis thaliana
AT3G05570 5.0kb upstream 5.0kb upstream 6238 true Chr3: 1616102-1622339 Arabidopsis thaliana
AT3G05570 5.0kb upstream 5.0kb upstream 5000 false Chr3: 1617340-1622339 Arabidopsis thaliana
AT3G05570 5.0kb downstream 5.0kb downstream 6238 true Chr3: 1611102-1617339 Arabidopsis thaliana
AT3G05570 5.0kb downstream 5.0kb downstream 5000 false Chr3: 1611102-1616101 Arabidopsis thaliana
AT3G05570 10.0kb upstream 10.0kb upstream 11238 true Chr3: 1616102-1627339 Arabidopsis thaliana
AT3G05570 10.0kb upstream 10.0kb upstream 10000 false Chr3: 1617340-1627339 Arabidopsis thaliana
AT3G05570 10.0kb downstream 10.0kb downstream 11238 true Chr3: 1606102-1617339 Arabidopsis thaliana
AT3G05570 10.0kb downstream 10.0kb downstream 10000 false Chr3: 1606102-1616101 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375597 5261 Brassicaceae View MSA
123836130 5264 Brassicales-Malvales View MSA
124341217 5266 SBM View MSA
124249922 5268 Malvidae View MSA
124050526 5270 Rosid View MSA
123743609 5271 Pentapetalae View MSA
122795780 5272 Eudicot View MSA
122044471 5273 Angiosperm View MSA
121351631 5274 Embryophyte View MSA
123382253 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.193        
cufflinks 9.713        
cufflinks 5.155       Low
cufflinks 9.857       High
cufflinks 5.285       Low
cufflinks 9.008        

0 Strain