Gene : NEK2 A. thaliana TAIR10
Primary Identifier:  ? AT3G04810 Defline:  (1 of 3) PTHR24362:SF255 - SERINE/THREONINE-PROTEIN KINASE NEK1
Genomic Order:  428 Name:  ? AT3G04810
Secondary Identifier:  ? PAC:19664863
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0 Pathways

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G04810 0.5kb upstream 0.5kb upstream 4535 true Chr3: 1316760-1321294 Arabidopsis thaliana
AT3G04810 0.5kb upstream 0.5kb upstream 500 false Chr3: 1316760-1317259 Arabidopsis thaliana
AT3G04810 0.5kb downstream 0.5kb downstream 4535 true Chr3: 1317260-1321794 Arabidopsis thaliana
AT3G04810 0.5kb downstream 0.5kb downstream 500 false Chr3: 1321295-1321794 Arabidopsis thaliana
AT3G04810 1.0kb upstream 1.0kb upstream 5035 true Chr3: 1316260-1321294 Arabidopsis thaliana
AT3G04810 1.0kb upstream 1.0kb upstream 1000 false Chr3: 1316260-1317259 Arabidopsis thaliana
AT3G04810 1.0kb downstream 1.0kb downstream 5035 true Chr3: 1317260-1322294 Arabidopsis thaliana
AT3G04810 1.0kb downstream 1.0kb downstream 1000 false Chr3: 1321295-1322294 Arabidopsis thaliana
AT3G04810 2.0kb upstream 2.0kb upstream 6035 true Chr3: 1315260-1321294 Arabidopsis thaliana
AT3G04810 2.0kb upstream 2.0kb upstream 2000 false Chr3: 1315260-1317259 Arabidopsis thaliana
AT3G04810 2.0kb downstream 2.0kb downstream 6035 true Chr3: 1317260-1323294 Arabidopsis thaliana
AT3G04810 2.0kb downstream 2.0kb downstream 2000 false Chr3: 1321295-1323294 Arabidopsis thaliana
AT3G04810 5.0kb upstream 5.0kb upstream 9035 true Chr3: 1312260-1321294 Arabidopsis thaliana
AT3G04810 5.0kb upstream 5.0kb upstream 5000 false Chr3: 1312260-1317259 Arabidopsis thaliana
AT3G04810 5.0kb downstream 5.0kb downstream 9035 true Chr3: 1317260-1326294 Arabidopsis thaliana
AT3G04810 5.0kb downstream 5.0kb downstream 5000 false Chr3: 1321295-1326294 Arabidopsis thaliana
AT3G04810 10.0kb upstream 10.0kb upstream 14035 true Chr3: 1307260-1321294 Arabidopsis thaliana
AT3G04810 10.0kb upstream 10.0kb upstream 10000 false Chr3: 1307260-1317259 Arabidopsis thaliana
AT3G04810 10.0kb downstream 10.0kb downstream 14035 true Chr3: 1317260-1331294 Arabidopsis thaliana
AT3G04810 10.0kb downstream 10.0kb downstream 10000 false Chr3: 1321295-1331294 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375139 5261 Brassicaceae View MSA
123841661 5264 Brassicales-Malvales View MSA
124342661 5266 SBM View MSA
124247909 5268 Malvidae View MSA
124070127 5270 Rosid View MSA
123743821 5271 Pentapetalae View MSA
122789481 5272 Eudicot View MSA
122043022 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121310065 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.818        
cufflinks 7.438       High
cufflinks 2.516        
cufflinks 5.708        
cufflinks 2.04       Low
cufflinks 6.257        

0 Strain