Gene : AT3G13070 A. thaliana TAIR10
Defline:  (1 of 2) PTHR22777:SF3 - UPF0053 INNER MEMBRANE PROTEIN YFJD Genomic Order:  1295
Name:  ? AT3G13070 Secondary Identifier:  ? PAC:19661668
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G13070 0.5kb upstream 0.5kb upstream 4262 true Chr3: 4191351-4195612 Arabidopsis thaliana
AT3G13070 0.5kb upstream 0.5kb upstream 500 false Chr3: 4195113-4195612 Arabidopsis thaliana
AT3G13070 0.5kb downstream 0.5kb downstream 4262 true Chr3: 4190851-4195112 Arabidopsis thaliana
AT3G13070 0.5kb downstream 0.5kb downstream 500 false Chr3: 4190851-4191350 Arabidopsis thaliana
AT3G13070 1.0kb upstream 1.0kb upstream 4762 true Chr3: 4191351-4196112 Arabidopsis thaliana
AT3G13070 1.0kb upstream 1.0kb upstream 1000 false Chr3: 4195113-4196112 Arabidopsis thaliana
AT3G13070 1.0kb downstream 1.0kb downstream 4762 true Chr3: 4190351-4195112 Arabidopsis thaliana
AT3G13070 1.0kb downstream 1.0kb downstream 1000 false Chr3: 4190351-4191350 Arabidopsis thaliana
AT3G13070 2.0kb upstream 2.0kb upstream 5762 true Chr3: 4191351-4197112 Arabidopsis thaliana
AT3G13070 2.0kb upstream 2.0kb upstream 2000 false Chr3: 4195113-4197112 Arabidopsis thaliana
AT3G13070 2.0kb downstream 2.0kb downstream 5762 true Chr3: 4189351-4195112 Arabidopsis thaliana
AT3G13070 2.0kb downstream 2.0kb downstream 2000 false Chr3: 4189351-4191350 Arabidopsis thaliana
AT3G13070 5.0kb upstream 5.0kb upstream 8762 true Chr3: 4191351-4200112 Arabidopsis thaliana
AT3G13070 5.0kb upstream 5.0kb upstream 5000 false Chr3: 4195113-4200112 Arabidopsis thaliana
AT3G13070 5.0kb downstream 5.0kb downstream 8762 true Chr3: 4186351-4195112 Arabidopsis thaliana
AT3G13070 5.0kb downstream 5.0kb downstream 5000 false Chr3: 4186351-4191350 Arabidopsis thaliana
AT3G13070 10.0kb upstream 10.0kb upstream 13762 true Chr3: 4191351-4205112 Arabidopsis thaliana
AT3G13070 10.0kb upstream 10.0kb upstream 10000 false Chr3: 4195113-4205112 Arabidopsis thaliana
AT3G13070 10.0kb downstream 10.0kb downstream 13762 true Chr3: 4181351-4195112 Arabidopsis thaliana
AT3G13070 10.0kb downstream 10.0kb downstream 10000 false Chr3: 4181351-4191350 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372193 5261 Brassicaceae View MSA
123839992 5264 Brassicales-Malvales View MSA
124341775 5266 SBM View MSA
124240862 5268 Malvidae View MSA
124069091 5270 Rosid View MSA
123736902 5271 Pentapetalae View MSA
122787819 5272 Eudicot View MSA
122045574 5273 Angiosperm View MSA
121346581 5274 Embryophyte View MSA
123426941 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.041       High
cufflinks 11.53        
cufflinks 14.428        
cufflinks 11.81        
cufflinks 12.541        
cufflinks 11.395        

0 Strain