Other
20 Flanking Regions
Region Name | Flank Size | Direction | Length | Gene Included? | Chromosome Location | Organism Name |
---|---|---|---|---|---|---|
AT3G12160 0.5kb upstream | 0.5kb | upstream | 1443 | true | Chr3: 3879495-3880937 | Arabidopsis thaliana |
AT3G12160 0.5kb upstream | 0.5kb | upstream | 500 | false | Chr3: 3880438-3880937 | Arabidopsis thaliana |
AT3G12160 0.5kb downstream | 0.5kb | downstream | 1443 | true | Chr3: 3878995-3880437 | Arabidopsis thaliana |
AT3G12160 0.5kb downstream | 0.5kb | downstream | 500 | false | Chr3: 3878995-3879494 | Arabidopsis thaliana |
AT3G12160 1.0kb upstream | 1.0kb | upstream | 1943 | true | Chr3: 3879495-3881437 | Arabidopsis thaliana |
AT3G12160 1.0kb upstream | 1.0kb | upstream | 1000 | false | Chr3: 3880438-3881437 | Arabidopsis thaliana |
AT3G12160 1.0kb downstream | 1.0kb | downstream | 1943 | true | Chr3: 3878495-3880437 | Arabidopsis thaliana |
AT3G12160 1.0kb downstream | 1.0kb | downstream | 1000 | false | Chr3: 3878495-3879494 | Arabidopsis thaliana |
AT3G12160 2.0kb upstream | 2.0kb | upstream | 2943 | true | Chr3: 3879495-3882437 | Arabidopsis thaliana |
AT3G12160 2.0kb upstream | 2.0kb | upstream | 2000 | false | Chr3: 3880438-3882437 | Arabidopsis thaliana |
AT3G12160 2.0kb downstream | 2.0kb | downstream | 2943 | true | Chr3: 3877495-3880437 | Arabidopsis thaliana |
AT3G12160 2.0kb downstream | 2.0kb | downstream | 2000 | false | Chr3: 3877495-3879494 | Arabidopsis thaliana |
AT3G12160 5.0kb upstream | 5.0kb | upstream | 5943 | true | Chr3: 3879495-3885437 | Arabidopsis thaliana |
AT3G12160 5.0kb upstream | 5.0kb | upstream | 5000 | false | Chr3: 3880438-3885437 | Arabidopsis thaliana |
AT3G12160 5.0kb downstream | 5.0kb | downstream | 5943 | true | Chr3: 3874495-3880437 | Arabidopsis thaliana |
AT3G12160 5.0kb downstream | 5.0kb | downstream | 5000 | false | Chr3: 3874495-3879494 | Arabidopsis thaliana |
AT3G12160 10.0kb upstream | 10.0kb | upstream | 10943 | true | Chr3: 3879495-3890437 | Arabidopsis thaliana |
AT3G12160 10.0kb upstream | 10.0kb | upstream | 10000 | false | Chr3: 3880438-3890437 | Arabidopsis thaliana |
AT3G12160 10.0kb downstream | 10.0kb | downstream | 10943 | true | Chr3: 3869495-3880437 | Arabidopsis thaliana |
AT3G12160 10.0kb downstream | 10.0kb | downstream | 10000 | false | Chr3: 3869495-3879494 | Arabidopsis thaliana |
10 Protein Familys
Cluster ID | Method ID | Method Name | Sequence Alignment |
---|---|---|---|
122369656 | 5261 | Brassicaceae | View MSA |
123829186 | 5264 | Brassicales-Malvales | View MSA |
124350170 | 5266 | SBM | View MSA |
124253200 | 5268 | Malvidae | View MSA |
124065082 | 5270 | Rosid | View MSA |
123746606 | 5271 | Pentapetalae | View MSA |
122786113 | 5272 | Eudicot | View MSA |
122041554 | 5273 | Angiosperm | View MSA |
121351595 | 5274 | Embryophyte | View MSA |
123426852 | 5275 | Viridiplantae | View MSA |
6 Rna Seq Expressionss
Analysis Method | Abundance | Low Confidence Limit | High Confidence Limit | Relative Library Expression | Relative Locus Expression |
---|---|---|---|---|---|
cufflinks | 0.046 | Low | |||
cufflinks | 0.096 | Low | High | ||
cufflinks | 0.05 | Low | |||
cufflinks | 0.016 | Low | Low | ||
cufflinks | 0.0 | Not Expressed | Not Expressed | ||
cufflinks | 0.0 | Not Expressed | Not Expressed |