Gene : AT3G09100 A. thaliana TAIR10
Defline:  (1 of 1) PTHR10367//PTHR10367:SF0//PTHR10367:SF11 - MRNA-CAPPING ENZYME // MRNA-CAPPING ENZYME // SUBFAMILY NOT NAMED Genomic Order:  864
Name:  ? AT3G09100 Secondary Identifier:  ? PAC:19663017
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G09100 0.5kb upstream 0.5kb upstream 6052 true Chr3: 2787981-2794032 Arabidopsis thaliana
AT3G09100 0.5kb upstream 0.5kb upstream 500 false Chr3: 2793533-2794032 Arabidopsis thaliana
AT3G09100 0.5kb downstream 0.5kb downstream 6052 true Chr3: 2787481-2793532 Arabidopsis thaliana
AT3G09100 0.5kb downstream 0.5kb downstream 500 false Chr3: 2787481-2787980 Arabidopsis thaliana
AT3G09100 1.0kb upstream 1.0kb upstream 6552 true Chr3: 2787981-2794532 Arabidopsis thaliana
AT3G09100 1.0kb upstream 1.0kb upstream 1000 false Chr3: 2793533-2794532 Arabidopsis thaliana
AT3G09100 1.0kb downstream 1.0kb downstream 6552 true Chr3: 2786981-2793532 Arabidopsis thaliana
AT3G09100 1.0kb downstream 1.0kb downstream 1000 false Chr3: 2786981-2787980 Arabidopsis thaliana
AT3G09100 2.0kb upstream 2.0kb upstream 7552 true Chr3: 2787981-2795532 Arabidopsis thaliana
AT3G09100 2.0kb upstream 2.0kb upstream 2000 false Chr3: 2793533-2795532 Arabidopsis thaliana
AT3G09100 2.0kb downstream 2.0kb downstream 7552 true Chr3: 2785981-2793532 Arabidopsis thaliana
AT3G09100 2.0kb downstream 2.0kb downstream 2000 false Chr3: 2785981-2787980 Arabidopsis thaliana
AT3G09100 5.0kb upstream 5.0kb upstream 10552 true Chr3: 2787981-2798532 Arabidopsis thaliana
AT3G09100 5.0kb upstream 5.0kb upstream 5000 false Chr3: 2793533-2798532 Arabidopsis thaliana
AT3G09100 5.0kb downstream 5.0kb downstream 10552 true Chr3: 2782981-2793532 Arabidopsis thaliana
AT3G09100 5.0kb downstream 5.0kb downstream 5000 false Chr3: 2782981-2787980 Arabidopsis thaliana
AT3G09100 10.0kb upstream 10.0kb upstream 15552 true Chr3: 2787981-2803532 Arabidopsis thaliana
AT3G09100 10.0kb upstream 10.0kb upstream 10000 false Chr3: 2793533-2803532 Arabidopsis thaliana
AT3G09100 10.0kb downstream 10.0kb downstream 15552 true Chr3: 2777981-2793532 Arabidopsis thaliana
AT3G09100 10.0kb downstream 10.0kb downstream 10000 false Chr3: 2777981-2787980 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367078 5261 Brassicaceae View MSA
123835353 5264 Brassicales-Malvales View MSA
124342630 5266 SBM View MSA
124249951 5268 Malvidae View MSA
124065683 5270 Rosid View MSA
123738577 5271 Pentapetalae View MSA
122791421 5272 Eudicot View MSA
122046582 5273 Angiosperm View MSA
121350766 5274 Embryophyte View MSA
123427499 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.602        
cufflinks 8.103        
cufflinks 5.915       Low
cufflinks 8.779       High
cufflinks 6.251       Low
cufflinks 8.102        

0 Strain