Gene : AT3G09140 A. thaliana TAIR10
Defline:  (1 of 9) PTHR33103//PTHR33103:SF4 - FAMILY NOT NAMED // EMB|CAB69840.1 Genomic Order:  868
Name:  ? AT3G09140 Secondary Identifier:  ? PAC:19661544
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G09140 0.5kb upstream 0.5kb upstream 2443 true Chr3: 2800853-2803295 Arabidopsis thaliana
AT3G09140 0.5kb upstream 0.5kb upstream 500 false Chr3: 2802796-2803295 Arabidopsis thaliana
AT3G09140 0.5kb downstream 0.5kb downstream 2443 true Chr3: 2800353-2802795 Arabidopsis thaliana
AT3G09140 0.5kb downstream 0.5kb downstream 500 false Chr3: 2800353-2800852 Arabidopsis thaliana
AT3G09140 1.0kb upstream 1.0kb upstream 2943 true Chr3: 2800853-2803795 Arabidopsis thaliana
AT3G09140 1.0kb upstream 1.0kb upstream 1000 false Chr3: 2802796-2803795 Arabidopsis thaliana
AT3G09140 1.0kb downstream 1.0kb downstream 2943 true Chr3: 2799853-2802795 Arabidopsis thaliana
AT3G09140 1.0kb downstream 1.0kb downstream 1000 false Chr3: 2799853-2800852 Arabidopsis thaliana
AT3G09140 2.0kb upstream 2.0kb upstream 3943 true Chr3: 2800853-2804795 Arabidopsis thaliana
AT3G09140 2.0kb upstream 2.0kb upstream 2000 false Chr3: 2802796-2804795 Arabidopsis thaliana
AT3G09140 2.0kb downstream 2.0kb downstream 3943 true Chr3: 2798853-2802795 Arabidopsis thaliana
AT3G09140 2.0kb downstream 2.0kb downstream 2000 false Chr3: 2798853-2800852 Arabidopsis thaliana
AT3G09140 5.0kb upstream 5.0kb upstream 6943 true Chr3: 2800853-2807795 Arabidopsis thaliana
AT3G09140 5.0kb upstream 5.0kb upstream 5000 false Chr3: 2802796-2807795 Arabidopsis thaliana
AT3G09140 5.0kb downstream 5.0kb downstream 6943 true Chr3: 2795853-2802795 Arabidopsis thaliana
AT3G09140 5.0kb downstream 5.0kb downstream 5000 false Chr3: 2795853-2800852 Arabidopsis thaliana
AT3G09140 10.0kb upstream 10.0kb upstream 11943 true Chr3: 2800853-2812795 Arabidopsis thaliana
AT3G09140 10.0kb upstream 10.0kb upstream 10000 false Chr3: 2802796-2812795 Arabidopsis thaliana
AT3G09140 10.0kb downstream 10.0kb downstream 11943 true Chr3: 2790853-2802795 Arabidopsis thaliana
AT3G09140 10.0kb downstream 10.0kb downstream 10000 false Chr3: 2790853-2800852 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029295 5273 Angiosperm View MSA
122329975 5261 Brassicaceae Singleton cluster - no MSA
123771251 5264 Brassicales-Malvales Singleton cluster - no MSA
124269783 5266 SBM Singleton cluster - no MSA
124125899 5268 Malvidae Singleton cluster - no MSA
124037993 5270 Rosid View MSA
123752528 5271 Pentapetalae View MSA
122797868 5272 Eudicot View MSA
121350471 5274 Embryophyte View MSA
123381749 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.016     Low  

0 Strain