Gene : RAPTOR1 A. thaliana TAIR10
Primary Identifier:  ? AT3G08850 Defline:  (1 of 2) K07204 - regulatory associated protein of mTOR (RAPTOR)
Genomic Order:  834 Name:  ? AT3G08850
Secondary Identifier:  ? PAC:19663071
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0 Pathways

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G08850 0.5kb upstream 0.5kb upstream 9218 true Chr3: 2686583-2695800 Arabidopsis thaliana
AT3G08850 0.5kb upstream 0.5kb upstream 500 false Chr3: 2695301-2695800 Arabidopsis thaliana
AT3G08850 0.5kb downstream 0.5kb downstream 9218 true Chr3: 2686083-2695300 Arabidopsis thaliana
AT3G08850 0.5kb downstream 0.5kb downstream 500 false Chr3: 2686083-2686582 Arabidopsis thaliana
AT3G08850 1.0kb upstream 1.0kb upstream 9718 true Chr3: 2686583-2696300 Arabidopsis thaliana
AT3G08850 1.0kb upstream 1.0kb upstream 1000 false Chr3: 2695301-2696300 Arabidopsis thaliana
AT3G08850 1.0kb downstream 1.0kb downstream 9718 true Chr3: 2685583-2695300 Arabidopsis thaliana
AT3G08850 1.0kb downstream 1.0kb downstream 1000 false Chr3: 2685583-2686582 Arabidopsis thaliana
AT3G08850 2.0kb upstream 2.0kb upstream 10718 true Chr3: 2686583-2697300 Arabidopsis thaliana
AT3G08850 2.0kb upstream 2.0kb upstream 2000 false Chr3: 2695301-2697300 Arabidopsis thaliana
AT3G08850 2.0kb downstream 2.0kb downstream 10718 true Chr3: 2684583-2695300 Arabidopsis thaliana
AT3G08850 2.0kb downstream 2.0kb downstream 2000 false Chr3: 2684583-2686582 Arabidopsis thaliana
AT3G08850 5.0kb upstream 5.0kb upstream 13718 true Chr3: 2686583-2700300 Arabidopsis thaliana
AT3G08850 5.0kb upstream 5.0kb upstream 5000 false Chr3: 2695301-2700300 Arabidopsis thaliana
AT3G08850 5.0kb downstream 5.0kb downstream 13718 true Chr3: 2681583-2695300 Arabidopsis thaliana
AT3G08850 5.0kb downstream 5.0kb downstream 5000 false Chr3: 2681583-2686582 Arabidopsis thaliana
AT3G08850 10.0kb upstream 10.0kb upstream 18718 true Chr3: 2686583-2705300 Arabidopsis thaliana
AT3G08850 10.0kb upstream 10.0kb upstream 10000 false Chr3: 2695301-2705300 Arabidopsis thaliana
AT3G08850 10.0kb downstream 10.0kb downstream 18718 true Chr3: 2676583-2695300 Arabidopsis thaliana
AT3G08850 10.0kb downstream 10.0kb downstream 10000 false Chr3: 2676583-2686582 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373648 5261 Brassicaceae View MSA
123828094 5264 Brassicales-Malvales View MSA
124345786 5266 SBM View MSA
124238592 5268 Malvidae View MSA
124067710 5270 Rosid View MSA
123738881 5271 Pentapetalae View MSA
122797949 5272 Eudicot View MSA
122045777 5273 Angiosperm View MSA
121349402 5274 Embryophyte View MSA
123426169 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.881        
cufflinks 13.245        
cufflinks 9.377       Low
cufflinks 14.355        
cufflinks 10.432        
cufflinks 14.672       High

0 Strain