Gene : AT3G08910 A. thaliana TAIR10
Defline:  (1 of 2) PTHR24078:SF298 - HEAT SHOCK PROTEIN 40-LIKE Genomic Order:  840
Name:  ? AT3G08910 Secondary Identifier:  ? PAC:19660449
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G08910 0.5kb upstream 0.5kb upstream 2242 true Chr3: 2710154-2712395 Arabidopsis thaliana
AT3G08910 0.5kb upstream 0.5kb upstream 500 false Chr3: 2711896-2712395 Arabidopsis thaliana
AT3G08910 0.5kb downstream 0.5kb downstream 2242 true Chr3: 2709654-2711895 Arabidopsis thaliana
AT3G08910 0.5kb downstream 0.5kb downstream 500 false Chr3: 2709654-2710153 Arabidopsis thaliana
AT3G08910 1.0kb upstream 1.0kb upstream 2742 true Chr3: 2710154-2712895 Arabidopsis thaliana
AT3G08910 1.0kb upstream 1.0kb upstream 1000 false Chr3: 2711896-2712895 Arabidopsis thaliana
AT3G08910 1.0kb downstream 1.0kb downstream 2742 true Chr3: 2709154-2711895 Arabidopsis thaliana
AT3G08910 1.0kb downstream 1.0kb downstream 1000 false Chr3: 2709154-2710153 Arabidopsis thaliana
AT3G08910 2.0kb upstream 2.0kb upstream 3742 true Chr3: 2710154-2713895 Arabidopsis thaliana
AT3G08910 2.0kb upstream 2.0kb upstream 2000 false Chr3: 2711896-2713895 Arabidopsis thaliana
AT3G08910 2.0kb downstream 2.0kb downstream 3742 true Chr3: 2708154-2711895 Arabidopsis thaliana
AT3G08910 2.0kb downstream 2.0kb downstream 2000 false Chr3: 2708154-2710153 Arabidopsis thaliana
AT3G08910 5.0kb upstream 5.0kb upstream 6742 true Chr3: 2710154-2716895 Arabidopsis thaliana
AT3G08910 5.0kb upstream 5.0kb upstream 5000 false Chr3: 2711896-2716895 Arabidopsis thaliana
AT3G08910 5.0kb downstream 5.0kb downstream 6742 true Chr3: 2705154-2711895 Arabidopsis thaliana
AT3G08910 5.0kb downstream 5.0kb downstream 5000 false Chr3: 2705154-2710153 Arabidopsis thaliana
AT3G08910 10.0kb upstream 10.0kb upstream 11742 true Chr3: 2710154-2721895 Arabidopsis thaliana
AT3G08910 10.0kb upstream 10.0kb upstream 10000 false Chr3: 2711896-2721895 Arabidopsis thaliana
AT3G08910 10.0kb downstream 10.0kb downstream 11742 true Chr3: 2700154-2711895 Arabidopsis thaliana
AT3G08910 10.0kb downstream 10.0kb downstream 10000 false Chr3: 2700154-2710153 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364329 5261 Brassicaceae View MSA
123831905 5264 Brassicales-Malvales View MSA
124346866 5266 SBM View MSA
124253408 5268 Malvidae View MSA
124067139 5270 Rosid View MSA
123747669 5271 Pentapetalae View MSA
122796849 5272 Eudicot View MSA
122043533 5273 Angiosperm View MSA
123429128 5275 Viridiplantae View MSA
121350390 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.52        
cufflinks 10.212        
cufflinks 5.178       Low
cufflinks 9.626        
cufflinks 5.642       Low
cufflinks 11.42       High

0 Strain