Gene : AT3G03870 A. thaliana TAIR10
Defline:  (1 of 2) PTHR33646:SF2 - F20H23.8 PROTEIN-RELATED Genomic Order:  328
Name:  ? AT3G03870 Secondary Identifier:  ? PAC:19664761
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G03870 0.5kb upstream 0.5kb upstream 2694 true Chr3: 994717-997410 Arabidopsis thaliana
AT3G03870 0.5kb upstream 0.5kb upstream 500 false Chr3: 994717-995216 Arabidopsis thaliana
AT3G03870 0.5kb downstream 0.5kb downstream 2694 true Chr3: 995217-997910 Arabidopsis thaliana
AT3G03870 0.5kb downstream 0.5kb downstream 500 false Chr3: 997411-997910 Arabidopsis thaliana
AT3G03870 1.0kb upstream 1.0kb upstream 3194 true Chr3: 994217-997410 Arabidopsis thaliana
AT3G03870 1.0kb upstream 1.0kb upstream 1000 false Chr3: 994217-995216 Arabidopsis thaliana
AT3G03870 1.0kb downstream 1.0kb downstream 3194 true Chr3: 995217-998410 Arabidopsis thaliana
AT3G03870 1.0kb downstream 1.0kb downstream 1000 false Chr3: 997411-998410 Arabidopsis thaliana
AT3G03870 2.0kb upstream 2.0kb upstream 4194 true Chr3: 993217-997410 Arabidopsis thaliana
AT3G03870 2.0kb upstream 2.0kb upstream 2000 false Chr3: 993217-995216 Arabidopsis thaliana
AT3G03870 2.0kb downstream 2.0kb downstream 4194 true Chr3: 995217-999410 Arabidopsis thaliana
AT3G03870 2.0kb downstream 2.0kb downstream 2000 false Chr3: 997411-999410 Arabidopsis thaliana
AT3G03870 5.0kb upstream 5.0kb upstream 7194 true Chr3: 990217-997410 Arabidopsis thaliana
AT3G03870 5.0kb upstream 5.0kb upstream 5000 false Chr3: 990217-995216 Arabidopsis thaliana
AT3G03870 5.0kb downstream 5.0kb downstream 7194 true Chr3: 995217-1002410 Arabidopsis thaliana
AT3G03870 5.0kb downstream 5.0kb downstream 5000 false Chr3: 997411-1002410 Arabidopsis thaliana
AT3G03870 10.0kb upstream 10.0kb upstream 12194 true Chr3: 985217-997410 Arabidopsis thaliana
AT3G03870 10.0kb upstream 10.0kb upstream 10000 false Chr3: 985217-995216 Arabidopsis thaliana
AT3G03870 10.0kb downstream 10.0kb downstream 12194 true Chr3: 995217-1007410 Arabidopsis thaliana
AT3G03870 10.0kb downstream 10.0kb downstream 10000 false Chr3: 997411-1007410 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369146 5261 Brassicaceae View MSA
123837615 5264 Brassicales-Malvales View MSA
124339499 5266 SBM View MSA
124251286 5268 Malvidae View MSA
124064474 5270 Rosid View MSA
123748778 5271 Pentapetalae View MSA
122792798 5272 Eudicot View MSA
122044291 5273 Angiosperm View MSA
121310268 5274 Embryophyte View MSA
123347804 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 25.95        
cufflinks 11.279        
cufflinks 21.548        
cufflinks 12.312        
cufflinks 29.459     High High
cufflinks 9.846       Low

0 Strain